Explore Academy Content
A catalog of all Academy pages, where you can browse for different pages based on category.
| Title | Description | Categories | Reading Time |
|---|---|---|---|
| ACID | Learn about ACID guarantees in TileDB. | foundation, tables | 8 min |
| AI & ML | TileDB is a great fit for Artificial Intelligence and Machine Learning workloads. Learn more about why in this section. | ai/ml | 1 min |
| API Reference | Explore the available APIs for interacting with TileDB programmatically. | reference | 2 min |
| API Tokens | API tokens are a useful tool for accessing TileDB Cloud assets programmatically. | accounts, organization admins, administration | 1 min |
| API Tokens | API tokens are a useful tool for accessing TileDB Cloud assets programmatically. | accounts, organization members | 1 min |
| API Usage | Learn about different examples of using the TileDB APIs with task graphs. | analyze, python, r | 8 min |
| Access Arrays on TileDB Cloud | Learn how to interact with arrays on TileDB Cloud programmatically. | arrays, tutorials, python, remote | 2 min |
| Access Control | TileDB Cloud allows you to share assets at extreme scale with anyone on the planet. | collaborate, access control | 1 min |
| Access Spatial Data | Learn how to access the spatial data components of a SOMA Experiment. | life sciences, single cell (soma), spatial, tutorials | 5 min |
| Accounts | Learn to set up your individual and organization accounts and how billing works for each account type. | accounts, administration | 1 min |
| Add New Measurements to an Existing SOMA Experiment | Learn how to add new measurements to an existing SOMA experiment to organize datasets that share the same observations but differ in their features. | life sciences, single cell (soma), tutorials, python, updates | 3 min |
| Add New Samples | Learn how to add new samples to a TileDB-VCF dataset, solving the N+1 problem. | life sciences, genomics (vcf), tutorials, writes, updates | 2 min |
| Add Query Conditions to a Query | Learn how to add query conditions to trim your result sets so only the data you need are returned. | arrays, tutorials, python, r, queries, query conditions | 1 min |
| Add Tile Filters to Arrays | Tile filters allow you to compress and encrypt attribute and dimension data for your arrays. | arrays, tutorials, python, r, tile filters | 2 min |
| Administrative Tasks | Learn how to perform common administrative tasks within your self-hosted TileDB installation. | administration | 1 min |
| Advanced Array Writes | This section teaches you about topics related to advanced writes, including consolidation and vacuuming, writing at a timestamp, and retrieving fragment info. | tutorials, arrays, writes | 1 min |
| Advanced Arrays Tutorials | Learn advanced topics surrounding arrays, including schema evolution, array upgrades, and supported storage backends. | tutorials, arrays | 1 min |
| Advanced Biomedical Imaging Tutorials | TileDB-Bioimaging tutorials for advanced users. | life sciences, biomedical imaging, tutorials | 1 min |
| Advanced Reads | Learn about advanced topics for reads, such as how to fetch fragment info and how to time travel across your arrays. | tutorials, arrays, reads, time traveling, fragments, array metadata, schema evolution | 1 min |
| Advanced Tables Tutorials | Tutorials on more advanced TileDB Table functionality that can make you power users. | tutorials, tables | 1 min |
| Advanced VCF Tutorials | Tutorials on more advanced TileDB-VCF functionality that can make you power users. | tutorials, life sciences, genomics (vcf) | 1 min |
| Advanced Vector Search Tutorials | Learn advanced topics surrounding TileDB-Vector-Search, including consolidation, time traveling, and object ingestion. | tutorials, ai/ml, vector search | 1 min |
| Aggregates | Aggregates are a powerful feature that allow you to perform operations on data directly in TileDB. | arrays, foundation, aggregates | 1 min |
| Amazon Elastic Container Registry | Learn how to set up Amazon ECR as a UDF image repository as an alternative to Dockerhub. | administration | 2 min |
| Amazon S3 | Learn how to integrate Amazon S3 with TileDB. | arrays, tutorials, amazon s3, configuration, backends, object stores | 10 min |
| Analyze | Accelerate analysis workflows with TileDB. | analyze | 1 min |
| Analyze Biomedical Images with PyTorch | Learn how to use TileDB-BioImaging with PyTorch. | biomedical imaging, life sciences, tutorials, machine learning, pytorch | 2 min |
| Analyze: Introduction | Accelerate analysis workflows with TileDB. | analyze | 2 min |
| Annotation VCFs | Learn about querying sampleless variant-only TileDB-VCF datasets. | life sciences, genomics (vcf), tutorials, annotation | 2 min |
| Annotations | How to produce and manage variant or interval annotations with TileDB-VCF. | life sciences, genomics (vcf), foundation, annotations | 3 min |
| Annotations Tutorials | Learn about using using annotations with TileDB-VCF datasets. | tutorials, life sciences, genomics (vcf), annotations | 1 min |
| Appending Data to a SOMA Experiment | Extend an existing SOMA experiment with new data. | life sciences, single cell (soma), tutorials, python, updates | 1 min |
| Apply for the Free Tier | If you’re an individual user trying out TileDB, you must apply for our free tier to receive $100 in credits for 6 months, which will give you time to thoroughly evaluate the platform. | accounts | 5 min |
| Array Assets | How to manage your arrays in TileDB. | arrays, catalog | 9 min |
| Array Compression | You can compress attributes, dimensions (in sparse arrays), or variable-length attribute offsets for more optimal storage. | arrays, foundation, compression | 11 min |
| Array Data Model | Learn about the TileDB array data model and the differences between dense and sparse arrays. | arrays, foundation, data model | 4 min |
| Array Metadata | You can store high-level key-value data in an array by adding array metadata. | arrays, foundation, array metadata | 1 min |
| Array Reads | Learn about reading data from TileDB arrays in this section. | arrays, foundation, reads | 10 min |
| Array Schema | The array schema stores details about the array such as what type it is, the dimensions and attributes, and more. | arrays, foundation, schema | 1 min |
| Array Storage | Multi-dimensional arrays are the foundation of TileDB and can adapt to whatever your data needs may be. | arrays, foundation, storage | 1 min |
| Array Time Traveling Tutorials | Time traveling allows you to view and compare different aspects of your arrays over time. | arrays, tutorials, time traveling | 1 min |
| Array Upgrade | New versions of the TileDB storage format require upgrading your arrays to support the latest features. | arrays, tutorials, python, r | 2 min |
| Arrays | Arrays are the foundation of TileDB. Learn about the use cases of arrays and why TileDB is built around them. | arrays | 1 min |
| Arrays API Reference | This section contains the full list of APIs built and supported by TileDB. | arrays, reference | 2 min |
| Arrays Foundation | Learn about the theory behind and the internal mechanics of TileDB arrays. | arrays, foundation | 1 min |
| Arrays Key Concepts | You can find all theoretical knowledge about TileDB arrays, from their storage format to their compuations, in this section. | arrays, foundation | 1 min |
| Arrays Performance | Learn useful tips and tricks for ensuring maximum performance across your arrays. | arrays, foundation, performance | 1 min |
| Arrays Quickstart | If you’re starting your journey into the world of multi-dimensional arrays, start with this Quickstart guide. | arrays, quickstart, tutorials, python, r, reads, writes | 6 min |
| Arrays Storage Format Spec | Review the storage format specification, which is open, documented, and fully maintained on GitHub. | arrays, foundation, storage format spec | 1 min |
| Arrays Tutorials | Learn about working with TileDB arrays, from ingesting data to managing your arrays, all with interactive tutorials. | tutorials, arrays | 1 min |
| Arrays Tutorials: Time Traveling | Time traveling allows you to view and compare different aspects of your arrays over time. | tutorials, arrays, time traveling | 1 min |
| Arrays and Biomedical Imaging | How arrays serve as a foundational data structure for TileDB-BioImaging. | life sciences, biomedical imaging, foundation | 1 min |
| Arrays and TileDB-VCF | How arrays serve as a foundational data structure for TileDB-VCF. | life sciences, genomics (vcf), foundation, arrays | 1 min |
| Arrays: Distributed Compute | Task graphs are a powerful feature of TileDB Cloud, allowing you to distribute work across numerous machines in a parallel, serverless manner. | arrays, foundation, scalable compute | 1 min |
| Arrays: Time Traveling | Time traveling is a powerful tool in TileDB allowing you to view and compare versions of your array at different points in time. | arrays, foundation, time traveling | 5 min |
| Asset Permissions | Learn about how permissions on multiple organizations impact a user’s permissions on an asset. | collaborate, organizations, access control | 4 min |
| Attributes | Attributes define the values TileDB stores inside the multi-dimensional cells. | arrays, foundation, attributes | 27 min |
| Azure Blob Storage | Learn how to integrate Azure Blob Storage with TileDB. | arrays, tutorials, storage backends, object stores, azure blob storage | 6 min |
| Backends | TileDB was designed to work with and is optimized for S3-compliant object stores. | tutorials, arrays, storage backends, object stores | 1 min |
| Basic Arrays Tutorials | Learn about basic interactions with TileDB arrays using these tutorials. | tutorials, arrays | 1 min |
| Basic Biomedical Imaging Tutorials | TileDB-BioImaging tutorials for beginners. | life sciences, biomedical imaging, tutorials, basics | 1 min |
| Basic Dense Array | Learn about basic functionality of dense arrays within TileDB, from ingestion to querying and beyond. | arrays, tutorials, python, r, dense | 2 min |
| Basic Ingestion | Learn how to ingest a small batch of gVCFs using TileDB-VCF. | life sciences, genomics (vcf), tutorials, ingestion | 3 min |
| Basic Population Genomics Tutorials | TileDB-VCF tutorials for beginners. | tutorials, life sciences, genomics (vcf) | 1 min |
| Basic Queries | Run basic read queries on a TileDB-VCF dataset. | life sciences, genomics (vcf), tutorials, queries | 1 min |
| Basic S3 Example with Arrays | Learn how to interact with TileDB arrays hosted in S3 and other object stores. | arrays, tutorials, python, amazon s3, object stores | 2 min |
| Basic S3 Example with Single-Cell Data | Learn how to use TileDB-SOMA with Amazon S3. | life sciences, single cell (soma), tutorials, python, r, remote access, storage backends | 4 min |
| Basic S3 Example with Tables | This page shows the basic usage of TileDB tables on Amazon S3. | tutorials, tables, python, remote access, storage backends | 1 min |
| Basic S3 Example with VCF Data | Demonstration of basic usage of TileDB-VCF on Amazon S3. | life sciences, genomics (vcf), tutorials, python, remote access, storage backends | 2 min |
| Basic S3 Example with Vector Search Data | Demonstration of basic usage of TileDB-Vector-Search on Amazon S3. | ai/ml, vector search, tutorials, storage backends | 1 min |
| Basic Sparse Array | Learn about basic functionality of sparse arrays within TileDB, from ingestion to querying and beyond. | arrays, tutorials, python, r, sparse | 2 min |
| Basic TileDB Cloud | Demonstration of basic usage of TileDB-VCF on TileDB Cloud. | life sciences, genomics (vcf), tutorials, remote access | 2 min |
| Basic Vector Search Tutorials | Learn about basic interactions with TileDB-Vector-Search using these tutorials. | tutorials, ai/ml, vector search | 1 min |
| Basics Tables Tutorials | TileDB tabular tutorials for beginners. | tutorials, tables | 1 min |
| Basics of ML Models | Learn about Machine Learning, different approaches to ML, and the ML lifecycle. | ai/ml, machine learning (ml), foundation | 5 min |
| Batched Ingestion of Biomedical Images | Learn How to ingest batches of biomedical images into TileDB. | life sciences, biomedical imaging, tutorials, ingestion, s3 | 3 min |
| Billing | Billing for organizations is handled by your account executive. Contact us for more details. | accounts, organization admins, administration | 1 min |
| Billing | Learn how credit usage works for organizations of which you are a member. | accounts, organization members | 2 min |
| Biomedical Images | Learn how you can catalog, manage, and preview biomedical images in the TileDB catalog. | biomedical imaging, catalog | 9 min |
| Biomedical Imaging | Learn about how TileDB handles biomedical imaging. | life sciences, biomedical imaging | 1 min |
| Biomedical Imaging Data Model | The data model used by TileDB-BioImaging for processing biomedical images. | life sciences, biomedical imaging, foundation, data model | 4 min |
| Biomedical Imaging Foundation | Learn about biomedical imaging and why TileDB is the right choice for imaging workloads. | life sciences, biomedical imaging | 1 min |
| Biomedical Imaging Key Concepts | The background theory on all the internal mechanics of TileDB-BioImaging. | life sciences, biomedical imaging, foundation | 1 min |
| Biomedical Imaging Quickstart | This tutorial covers the basics of working with histopathology images using TileDB-BioImaging. | biomedical imaging, life sciences, quickstart | 3 min |
| Biomedical Imaging Reads | Key concepts for reading imaging data stored in a TileDB-BioImaging dataset. | life sciences, biomedical imaging, foundation, reads | 2 min |
| Biomedical Imaging Storage Format Specification | The storage format specification of TileDB-BioImaging. | life-sciences, biomedical-imaging, foundation, storage format spec | 58 min |
| Biomedical Imaging Tutorials | This section contains hands-on tutorials for working with biomedical imaging data. | life sciences, biomedical imaging, tutorials | 1 min |
| Bulk Ingestion Tutorial | How to perform large-scale ingestion of H5AD files into a TileDB-SOMA Experiment | life sciences, single cell (soma), tutorials, python, ingestion, ETL | 8 min |
| CSV Ingestion | Learn about different CSV ingestion options available in TileDB. | foundation, tables, ingestion | 1 min |
| CSV Ingestion Tutorial | This tutorial covers the various modes of CSV ingestion with TileDB. | tutorials, tables, ingestion | 2 min |
| Catalog | Extreme discoverability across all your assets with a holistic catalog and search functionality. | catalog | 1 min |
| Catching Errors | You can handle errors within TileDB by using your preferred API language’s exception handling functionality. | arrays, tutorials, python, r, error handling | 1 min |
| Cells | The cell is the atomic element of array and is defined by the coordinate values of the array dimensions. | arrays, foundation, cells | 1 min |
| Chunked Ingestion of Biomedical Images | Learn how to ingest biomedical images in chunks into TileDB. | biomedical imaging, life sciences, tutorials, ingestion | 2 min |
| Cloud API | life sciences, genomics (vcf), reference | 6 min | |
| Cloud Credentials | To create, register, and access arrays through TileDB Cloud, you need to set up access credentials. | accounts, remote access, administration | 16 min |
| Cloud Credentials | To create, register, and access arrays through TileDB Cloud, you need to set up access credentials. | accounts, organization admins, administration | 1 min |
| Cloud Credentials | To create, register, and access arrays through TileDB Cloud, you need to set up access credentials. | accounts, organization members | 1 min |
| Cloud Execution of ML Models | You can execute machine learning pipelines in TileDB Cloud. Learn about the advantages of cloud execution in this page. | ai/ml, machine learning (ml), foundation, remote access | 2 min |
| Code | Catalog functionality for code assets. | catalog | 1 min |
| Collaborate | Govern all of your data and eliminate information silos by leveraging the collaboration tools available with TileDB. | collaborate | 1 min |
| Collaborate with the TileDB Marketplace | The TileDB Marketplace is a vast collection of objects made public for you to use with your analytics. | collaborate, python, marketplace | 4 min |
| Collaborate: Introduction | Learn about how TileDB’s collaboration features can keep your data safe and expedite scientific development. | collaborate | 2 min |
| Columnar Storage | Learn about TileDB’s underlying storage and how it relates to row-based and column-based systems. | foundation, tables, storage | 1 min |
| Commits | Each commit in a TileDB array corresponds to a successfully-written fragment and enables you to read data from that fragment. | arrays, foundation, commits | 1 min |
| Compress Array Data | Learn how you can compress your array data for a smaller persisted storage footprint. | arrays, tutorials, python, r, compression | 1 min |
| Compression Performance | Learn about the factors to consider when implementing array compression, as well as why you should use compression for your arrays. | arrays, foundation, performance, compression | 2 min |
| Compute | Learn about the key concepts of compute related to TileDB. | arrays, foundation | 1 min |
| Compute Aggregate Queries | TileDB supports fast and parallel aggregation of results without the need to compute them externally. | arrays, tutorials, python, r, aggregates | 2 min |
| Concurrency | TileDB eases concurrency with its lock-free multiple writer and lock-free multiple reader. | 4 min | |
| Configure Single Sign-On | Learn how to enable OpenID Connect SSO providers. | administration, single sign-on (sso) | 5 min |
| Consolidate Array Data | These tutorials offer examples of how to consolidate different aspects of your arrays to boost performance. | tutorials, arrays, consolidation | 1 min |
| Consolidate Array Metadata | Learn how to consolidate array metadata with this tutorial. | arrays, tutorials, python, r, array metadata, consolidation | 2 min |
| Consolidate Commits | Similar to consolidating fragments, you can consolidate commits to boost read performance. | arrays, tutorials, python, r, consolidation, commits | 2 min |
| Consolidate Fragment Metadata | Learn how to consolidate fragment metadata on your arrays. | arrays, tutorials, python, r, fragments, fragment metadata, consolidation | 3 min |
| Consolidate Fragments | Consolidating fragments will help boost read performance. You can learn about consolidating fragments in this tutorial. | arrays, tutorials, python, r, fragments, consolidation | 3 min |
| Consolidate Fragments in a Fragment List | You can specify exactly which fragments will be consolidated during the consolidation process. | arrays, tutorials, python, consolidation, fragments | 2 min |
| Consolidate Vector Index Data | TileDB-Vector-Search allows you to consolidate vector indexes to boost performance after numerous updates and deletions. | ai/ml, vector search, tutorials, consolidation | 2 min |
| Consolidation | Consolidation allows you to merge timestamped files across the platform to help boost read performance. | arrays, foundation, consolidation | 15 min |
| Create a Consolidation Plan | Learn how to generate a consolidation plan and use it for consolidation. | arrays, tutorials, python, consolidation | 2 min |
| Create an Organization | To get started as an organization owner, you must first create an organization in TileDB. | accounts, organization admins, administration | 2 min |
| Credits | Learn how you can view your credit usage on TileDB Cloud for individual user namespaces. | accounts | 2 min |
| Customize Jupyter Notebook Images | Learn how to customize the images used for Jupyter notebooks. | administration, notebooks | 3 min |
| Customize User-Defined Function Images | Learn how to customize the Docker images used for UDFs. | administration, user-defined functions | 3 min |
| Dashboard Assets | Learn how you can catalog and manage your dashboards in TileDB. | dashboards, catalog | 5 min |
| Dashboards | Present and analyze data with dashboards in TileDB. | analyze, dashboards | 1 min |
| Data | Learn all about the data modalities you can catalog in TileDB. | catalog | 1 min |
| Data Access | Learn how to access TileDB-SOMA data in a variety of ways. | life sciences, single cell (soma), tutorials, python, r, reads | 7 min |
| Data Layout | Learn about the TileDB data layout in this section, including the cell global order, the columnar format, data tiles, and fill values. | arrays, foundation, data layout | 6 min |
| Data Layout | Learn how the tile order and cell order affect the data layout on storage. | 2 min | |
| Data Manipulation | Learn about how TileDB handles data manipulation methods, including inserts, upserts, and deletes. | foundation, tables, writes, deletions, updates | 2 min |
| Data Structures | Learn about the key data structures in TileDB-SOMA in this page. | life sciences, single cell (soma), foundation | 4 min |
| Data Structures | Learn about the key data structures for spatial omics in TileDB-SOMA on this page. | life sciences, single cell (soma), spatial, foundation | 3 min |
| Dataframes | Learn about TileDB’s support for dataframes. | foundation, tables, dataframes | 1 min |
| Datetimes | Datetime values work well as attributes or array domains within TileDB. | arrays, foundation, datetimes | 7 min |
| Delete Array Data | You can delete data written to a TileDB array while preserving the full time-traveling functionality. | arrays, tutorials, python, r, deletions | 2 min |
| Delete Vector Index Data | Learn how to delete data from your vectors with TileDB-Vector-Search. | ai/ml, vector search, tutorials, deletions | 2 min |
| Deleting Samples | Learn how to delete samples from a TileDB-VCF dataset. | life sciences, genomics (vcf), tutorials, deletions | 1 min |
| Dense vs. Sparse | Deciding whether to use a dense array or a sparse array to hold your data is one of the first decisions you must make when creating an array. | arrays, foundation, performance, dense, sparse | 2 min |
| Deployment Methods | Learn about about the deployment methods of the variety of vector search algorithms supported by TileDB. | ai/ml, vector search, foundation | 5 min |
| Dimensions | A dimension represents some characteristic of your data, and dimensions define the hyperspace of the array. | arrays, foundation, dimensions | 14 min |
| Dimensions vs. Attributes | This page contains advice on choosing dimensions vs. attributes when designing your array schema. | arrays, foundation, performance, dimensions, attributes | 2 min |
| Distance Metrics | Learn about the supported distance metrics in TileDB’s vector search functionality. | ai/ml, vector search, foundation, distance metrics | 4 min |
| Domain | The domain of an array is the entire hyperspace of the array where cells can exist. | arrays, foundation, domain | 2 min |
| Drug Discovery App | Learn how to build a drug discovery app in TileDB that accepts an AnnData file and produces rich visualizations with Streamlit. | life sciences, single cell (soma), tutorials, dashboards, notebooks, python, streamlit | 2 min |
| Embedded Annotations | Learn about querying embedded variant annotations in TileDB-VCF datasets. | life sciences, genomics (vcf), tutorials, annotations | 2 min |
| Encrypt an Array with an AES-256-GCM Key | Learn how to encrypt your arrays with AES-256 key for secure storage. | arrays, tutorials, python, r, encryption | 2 min |
| Encryption | TileDB supports encrypting arrays using AES-256-GCM to protect your organization’s most sensitive data. | arrays, foundation, encryption | 2 min |
| Export to VCF | How to losslessly export samples to VCF and CombinedVCF. | life sciences, genomics (vcf), tutorials, export | 2 min |
| External Annotations | Learn about joining variant annotation sources with TileDB-VCF datasets. | life sciences, genomics (vcf), tutorials, annotations, remote access | 2 min |
| File Search | This tutorial demonstrates how to create a vector index for PDF files, and search over the files using an English phrase. | ai/ml, vector search, tutorials, search | 2 min |
| Files | In TileDB, you can import and securely manage all your files, no matter how complex and diverse. | 1 min | |
| Find Annotations in the TileDB Marketplace | Learn about searching for annotation resources in the TileDB Marketplace. | life sciences, genomics (vcf), tutorials, annotations, search | 1 min |
| Foundation | Learn about the fundamental concepts underlying TileDB-SOMA spatial omics support. | life sciences, single cell (soma), spatial, foundation | 1 min |
| Fragment Metadata | Each fragment of an array contains metadata about the fragment, including the number of cells, the file offsets, and aggregate and indexing information. | arrays, foundation, fragments, fragment metadata | 1 min |
| Fragments | Fragments are timestamped writes to a TileDB array. | arrays, foundation, fragments | 2 min |
| Genomics (VCF) | How to manage VCF data in TileDB. | genomics (vcf), catalog | 10 min |
| Get Fragment Info | You can fetch information about array fragments. | arrays, tutorials, python, r, fragments | 2 min |
| Get Started | This document explains the fastest way to get set up and start using TileDB. | onboarding | 11 min |
| Get Written Array Fragment Info | Learn how to retrieve the information of a written fragment. | arrays, tutorials, writes, python, r | 2 min |
| Glossary | A complete glossary of terms related to TileDB and and all supported solutions. | reference | 17 min |
| Google Cloud Storage | Learn how to integrate Google Cloud Storage (GCS) with TileDB. | arrays, tutorials, google cloud storage (gcs), configuration, storage backends, object stores | 8 min |
| Groups | Organize your data and code assets into groups that act like folders. | catalog, groups | 10 min |
| Groups | Groups allow organizing arrays into logical hierarchies. This is especially useful for object stores that might not have the concept of a directory. | arrays, foundation, groups | 1 min |
| Groups | Learn how to organize your TileDB arrays in a virtual hierarchy, which is especially useful when working with S3-based object storage. | arrays, tutorials, groups | 3 min |
| Handle Large VCF Queries | Learn how to handle VCF queries that are larger than the RAM available on a single machine. | life sciences, genomics (vcf), tutorials, queries | 2 min |
| Image Customization | You can define custom images for your TileDB Self-hosted installation if you frequently require specific packages. | administration | 1 min |
| Image Search | Learn how to perform similarity search over images, generating image embeddings and using TileDB-Vector-Search to add them to vector indexes and query them. | ai/ml, vector search, tutorials, search | 2 min |
| Incomplete Queries | Learn how TileDB gracefully handles queries larger than the memory set to hold the query result. | 1 min | |
| Indexes | Learn how tables in TileDB use indexing and how it maps to traditional tabular indexes. | foundation, tables, indexing | 3 min |
| Indexing | TileDB supports indexing, which enables efficient data retrieval from disk. | arrays, foundation, indexing | 2 min |
| Individual | Set up your individual account profile and preferences, and claim free credits to try out TileDB. | accounts | 1 min |
| Ingest Biomedical Images | Learn how to ingest a biomedical image with TileDB. | life sciences, biomedical imaging, ingestion, python | 2 min |
| Ingest Dense Data into a Machine Learning Model | Learn how to ingest and perform basic ML operations on the MNIST dense dataset. | tutorials, ai/ml, machine learning (ml), imgestion | 3 min |
| Ingest Sparse Data into a Machine Learning Model | Learn how to ingest and perform basic ML operations on the MovieLens 100k sparse dataset. | tutorials, ai/ml, machine learning (ml), ingestion | 3 min |
| Ingesting Annotations | Learn about ingesting tabular annotations into TileDB arrays. | life sciences, genomics (vcf), tutorials, annotations | 2 min |
| Ingestion & Querying | Learn how to ingest basic vector data with TileDB-Vector-Search and perform similarity search. | ai/ml, vector search, tutorials, ingestion, queries | 3 min |
| Ingestion of Biomedical Images | Learn how you can use TileDB to load biomedical image data efficiently into a TileDB-BioImaging dataset with optimized read performance. | life sciences, biomedical imaging, foundation, ingestion | 1 min |
| Ingestion with SQL | Learn how to create tables and add rows to them using SQL. | tutorials, tables, python, sql, ingestion | 3 min |
| Inspect Array Schema Members | Learn how to view various aspects of a TileDB array schema, such as its members, domain, dimensions, attributes, and filters. | arrays, tutorials, python, r | 2 min |
| Inspect Biomedical Images with the OpenSlide API | Learn how to read a biomedical image with TileDB Openslide API. | life sciences, biomedical imaging, reads, tutorials, python | 2 min |
| Inspect ML Model Schema Members | Just like TileDB arrays, you can inspect various aspects of a ML model schema, including its members, domain, attributes, and filters. | ai/ml, machine learning (ml), tutorials, python, schema | 1 min |
| Installation | This page contains an overview of how to install TileDB Cloud Self-hosted. | self-hosting, administration, installation | 45 min |
| Integrate TileDB-BioImaging with the napari Plugin | Learn How to render TileDB images in napari. | life-sciences, biomedical-imaging, tutorials, napari | 2 min |
| Introduction | Learn how TileDB’s Catalog functionality works. | catalog | 3 min |
| Introduction | This introduces scalable computation in TileDB Cloud. | scale | 3 min |
| Introduction | Learn about TileDB-SOMA’s support for spatial omics datasets. | life sciences, single cell (soma), spatial | 2 min |
| Introduction to Access Control | TileDB Cloud allows you to share assets at extreme scale with anyone on the planet. | collaborate, access control | 1 min |
| Introduction to Arrays | An introduction to arrays and their benefits, and an outline of the rest of the Arrays section. | arrays | 3 min |
| Introduction to Biomedical Imaging | TileDB offers a specialized product, called TileDB-BioImaging, specifically designed for managing and analyzing digital histopathology images. | life sciences, biomedical imaging | 5 min |
| Introduction to Dashboards | An introduction to TileDB dashboards, a powerful visualization tool for data analysis based on notebooks. | analyze, dashboards | 2 min |
| Introduction to Files | TileDB allows you to import, securely manage, and search over all your files. | files, catalog | 8 min |
| Introduction to ML Models | Learn about the basics of Machine Learning models and why TileDB is the right fit for ML workflows. | ai/ml, machine learning (ml) | 3 min |
| Introduction to Population Genomics | TileDB offers a specialized product, called TileDB-VCF, specifically designed for managing and analyzing biobank-scale variant data. | life sciences, genomics (vcf) | 11 min |
| Introduction to Single-Cell | Learn why TileDB is the ideal solution for single-cell genomics data management and analysis. | life sciences, single cell (soma) | 3 min |
| Introduction to Tables | Learn why TileDB is the ideal solution for tabular data management and analysis. | tables | 3 min |
| Introduction to Vector Search | Learn why TileDB is an ideal solution for vector search. | ai/ml, vector search | 8 min |
| Join IDs | Learn about the use of join IDs in TileDB-SOMA. | life sciences, single cell (soma), foundation | 7 min |
| LLM Memory | Learn how to augment LLMs with conversational memory using a TileDB-Vector-Search index on the conversation history. | ai/ml, vector search, tutorials, conversational memory | 1 min |
| Launch a Notebook | Select and launch the appropriate TileDB notebook server environment for your analytics. | analyze, notebooks | 2 min |
| Life Sciences | This section explains why TileDB is the platform for bleeding-edge multi-omics data. | life sciences | 1 min |
| Logging | Logging is an essential feature for organizations to audit usage of their systems. | collaborate, logging | 2 min |
| Lustre | Lustre is a POSIX-compliant distributed filesystem that works seamlessly with TileDB. | arrays, tutorials, storage backends, object stores, lustre | 1 min |
| ML Ingestion | Learn how to ingest ML models and both dense and sparse data into TileDB for use with training. | tutorials, ai/ml, machine learning (ml), ingestion | 1 min |
| ML Management | Learn how to manage your ML data and models within TileDB with these guided tutorials. | tutorials, ai/ml, machine learning (ml) | 1 min |
| ML Model Ingestion | Learn how to store, load, and register a ML model into TileDB for use with training. | tutorials, ai/ml, machine learning (ml), ingestion | 2 min |
| ML Models | Learn how TileDB catalogs and manages machine learning models. | machine learning (ml), catalog | 6 min |
| ML Models Foundation | Learn about Machine Learning, different approaches to ML, and the ML lifecycle. | ai/ml, machine learning (ml), foundation | 1 min |
| ML Models Quickstart | Learn how to install TileDB-ML and work with various libraries, including TensorFlow and PyTorch. | ai/ml, quickstart, tutorials, machine learning (ml) | 4 min |
| ML Models Tutorials | These guided tutorials will help you work with both ML datasets and models. | tutorials, ai/ml, machine learning (ml) | 1 min |
| ML Models: Data Ingestion | Store, load, and register dense and sparse datasets into TileDB for use with training. | tutorials, ai/ml, machine learning (ml), ingestion | 1 min |
| ML Models: Time Traveling | Learn how to time-travel between versions of ML models, similar to time traveling through array data. | tutorials, ai/ml, machine learning (ml), time traveling | 2 min |
| Machine Learning Models | Learn about the basics of Machine Learning models and why TileDB is the right fit for ML workflows. | ai/ml, machine learning (ml) | 1 min |
| Machine Learning with Biomedical Images | Learn how to harness the power of machine learning for biomedical imaging. | life sciences, biomedical imaging, tutorials, advanced, machine learning | 1 min |
| Machine Learning: Groups | You will learn how to organize your ML assets in groups with this tutorial. | ai/ml, machine learning (ml), tutorials, groups | 2 min |
| Manage Coordinate Spaces | Learn how to manage spatial coordinates in TileDB-SOMA. | life sciences, single cell (soma), spatial, tutorials | 5 min |
| Management | Learn how to administer your TileDB arrays and supporting objects with these tutorials. | tutorials, arrays | 1 min |
| Marketplace | How to make your assets publicly available, as well as browse assets published by others. | catalog, marketplace | 1 min |
| Members | You can view and edit your organization’s members. | accounts, organization admins, administration | 6 min |
| Members | You can view other members of your organization, as well as their roles in the organization. | accounts, organization members | 1 min |
| Microsoft Entra SSO | Learn how to enable Microsoft Entra SSO in your TileDB workspace. | 4 min | |
| MinIO | MinIO is a lightweight, S3-compliant object store that seamlessly well with TileDB. | arrays, tutorials, storage backends, object stores, minio | 2 min |
| Modify Array Metadata | Array metadata is a powerful way to assign key-value information to an array. Learn how to work with array metadata in this tutorial. | arrays, tutorials, python, r, array metadata | 2 min |
| Monitor | Gather details about your system, including your active servers, as well as any tasks and task graphs executed in TileDB. | analyze, monitor | 1 min |
| Multi-Experiment Queries | Learn how to query and process multiple SOMA experiments in parallel using the SOMA Experiment Collection Mapper. | life sciences, single cell (soma), tutorials, queries | 1 min |
| Multi-Range Reads | You can read array data that spans multiple ranges, rather than running several individual read queries. | tutorials, arrays, python, r, reads | 1 min |
| Multi-Region Redirection | Learn how TileDB Cloud supports automatic region redirection to reduce latency and egress costs. | analyze | 3 min |
| Multiple Attributes | TileDB arrays support complex attribute structures with different data types. | arrays, tutorials, python, r, attributes | 2 min |
| Notebook Assets | Notebooks offer an easy way to analyze your data in the TileDB securely governed and compliant environment. | notebooks, catalog | 7 min |
| Notebook Image Dependencies | A full list of each image in TileDB and their conda dependencies. | analyze, notebooks | 1 min |
| Notebooks | Limitless notebook environments for analysis with TileDB. | analyze, notebooks | 1 min |
| Nullable Attributes | Learn how to work with arrays that contain nullable attributes. | 3 min | |
| Object Management | Learn how to manage your array and group objects, including adding, modifying, and removing objects. | arrays, tutorials, python, r | 2 min |
| Object Stores | TileDB works seamlessly with cloud object stores, so your data can live under your control. | arrays, foundation, object stores | 1 min |
| Okta SCIM | Learn how to configure TileDB Cloud Self-Hosted for Okta SCIM. | administration, single sign-on (sso), okta | 7 min |
| OpenID Connect | Learn how to set up OpenID Connect (OIDC) with TileDB Cloud Self-hosted. | self-hosting, administration, single sign-on (sso) | 5 min |
| Optimize Tables | Learn about typical DBA performance optimization operations, such as consolidation and vacuuming. | foundation, tables, performance | 1 min |
| Org Member | Learn how to get started as a member of an organization. | accounts, organization members | 1 min |
| Organization Admins | Learn how to create an organization and set up your organizational profile and preferences. | accounts, organization admins, administration | 1 min |
| Organization Invitations | Organization owners can send you invitations to join their organization in TileDB. | accounts, organization members | 1 min |
| Organizations | Organizations are a special type of namespace to simplify access control. | organizations, collaborate | 8 min |
| Overview | The Overview tab of your profile contains high-level details about your user account. | accounts | 3 min |
| Overview | The Overview tab of your organization’s profile contains high-level details about your organization. | accounts, organization admins, administration | 2 min |
| Overview | The Overview tab of your organization’s profile contains high-level details about your organization. | accounts, organization members | 1 min |
| Parallelism | TileDB is fully paralyzed internally, meaning it uses multiple threads to process in parallel the most heavyweight tasks. | 4 min | |
| Population Genomics | Learn how TileDB manages and analyzes population-level variant data. | life sciences, genomics (vcf) | 1 min |
| Population Genomics API Reference | Documentation around the APIs of all population genomics libraries | life sciences, genomics (vcf), reference | 1 min |
| Population Genomics Data Model | The data model used by TileDB-VCF for processing population genomics data. | life sciences, genomics (vcf), foundation, data model | 6 min |
| Population Genomics Foundation | Learn about variant data and population genomics and why TileDB is the right choice for VCF workloads. | life sciences, foundation, genomics (vcf) | 1 min |
| Population Genomics Key Concepts | The background theory on all the internal mechanics of TileDB-VCF. | life sciences, foundation, genomics (vcf) | 1 min |
| Population Genomics Performance | Tips for boosting performance when using TileDB-VCF. | life sciences, genomics (vcf), tutorials, performance | 6 min |
| Population Genomics Quickstart | This tutorial covers the basics of working with VCF data using TileDB-VCF. | life sciences, genomics (vcf), quickstart, tutorials, python | 4 min |
| Population Genomics Tutorials | This section contains hands-on tutorials for working with population genomics data. | tutorials, life sciences, genomics (vcf) | 1 min |
| Population Genomics: Distributed Compute | How to leverage TileDB task graphs for scalable ingestion and analysis. | life sciences, genomics (vcf), foundation, scalable compute | 1 min |
| Population Genomics: Scalable Ingestion | Learn about how to ingest VCF data into TileDB at scale with this tutorial. | life sciences, genomics (vcf), tutorials, ingestion | 2 min |
| Population Genomics: Scalable Queries | Learn about using TileDB task graphs to perform distributed queries on TileDB-VCF datasets. | life sciences, genomics (vcf), tutorials, queries | 2 min |
| Preview Assets in TileDB Cloud | TileDB contains built-in previewers for biomedical images, files, and ML models. | analyze, biomedical imaging, files, machine learning (ml) | 1 min |
| Profile | Set up your individual account profile and preferences. | accounts | 1 min |
| Profile | Learn how to set up your organizational profile and preferences. | accounts, organization admins, administration | 1 min |
| Profile | Learn how to intereact with organizations in TileDB. | accounts, organization members | 1 min |
| Protein Search | Learn how to use TileDB-Vector-Search to perform a similarity search for a protein dataset. | ai/ml, vector search, tutorials, python, search | 3 min |
| Public Assets | Public assets on the TileDB Marketplace enable all TileDB users to use the power of community to propel scientific discovery. | collaborate, assets | 3 min |
| Python API | life sciences, genomics (vcf), reference | 75 min | |
| Query Conditions | Query conditions allow you to pare down your query results, so you only fetch the data you need. | arrays, foundation, queries, query conditions | 1 min |
| Query Transforms | Learn about using transforms in TileDB-VCF distributed queries. | life sciences, genomics (vcf), tutorials, queries | 2 min |
| RAG LLM | Learn how to augment LLMs with vector search with TileDB-Vector-Search and LangChain. | ai/ml, vector search, tutorials, retrieval-augmented generation | 3 min |
| REST API Tokens | REST API tokens are a useful tool for accessing TileDB Cloud assets programmatically. | accounts | 3 min |
| Read Biomedical Images | Learn how to read biomedical images with TileDB. | life sciences, biomedical imaging, tutorials, basics, reads | 1 min |
| Read Biomedical Images with TileDB-Py | Learn how to read a biomedical image with TileDB-Py API. | life sciences, biomedical imaging, tutorials, reads, python | 2 min |
| Result Estimation | TileDB can estimate the size of a query result, so you can allocate buffers for a particular query correctly. | 2 min | |
| Run Array Schema Evolution | As your data and business requirements evolve, so should your array schema. TileDB allows for versioned updates to your array schema. | arrays, tutorials, python, r, schema evolution | 2 min |
| Run TileDB-SOMA Locally | Learn how to run TileDB-SOMA on your local machine, and interact with local file systems and TileDB Cloud. | life sciences, single cell (soma), tutorials, python, r, local access | 6 min |
| Run TileDB-Tables Locally | This tutorial shows how to use TileDB’s tabular offering on your own machine. | tutorials, tables, local access | 2 min |
| Run TileDB-Vector-Search Locally | How to install TileDB-Vector-Search and interact with TileDB Cloud from your local machine. | ai/ml, vector search, tutorials, local access | 2 min |
| Run Time Traveling on Array Schema Evolution | Learn how to time travel on array schema evolution, which is useful for when your array data model changes over time. | arrays, tutorials, python, schema evolution, time traveling | 3 min |
| Run User-Defined Functions with VCF Datasets | Learn how to use user-defined functions to perform flexible analysis on TileDB. | life sciences, genomics (vcf), tutorials, r, python, user-defined functions | 3 min |
| SOMA API Specification | The SOMA API specification details the data model and API for managing single-cell genomics data with TileDB-SOMA. | life sciences, single cell (soma), foundation, reference | 1 min |
| SQL Connectors | Learn about TileDB’s SQL connectors. | foundation, tables, sql | 1 min |
| SQL Queries | Learn how to use SQL to query TileDB-SOMA experiments. | life sciences, single cell (soma), tutorials, python, sql | 4 min |
| Sample Metadata | Learn how to extend TileDB-VCF with the help of TileDB arrays to perform complex queries with this tutorial. | life sciences, genomics (vcf), tutorials, metadata | 3 min |
| Scale | TileDB offers extreme scale with an elastic architecture that reduces costs. | scale | 1 min |
| Schema Evolution | As your data evolves, so should your supporting objects. TileDB offers a way to make changes to your array schema to keep up with your data needs. | arrays, foundation, schema evolution | 1 min |
| Search | Easily search across all your data and code assets. | catalog | 2 min |
| Self-Hosting | Learn about how to install and manage your TileDB Self-hosted installation. | self-hosting, administration | 1 min |
| Serverless SQL | Learn how TileDB Cloud supports serverless SQL. | foundation, tables, sql, remote access | 2 min |
| Serverless SQL Tutorial | Learn how serverless SQL enables you to perform analysis | tutorials, sql, remote access | 1 min |
| Shapes in TileDB-SOMA | Arrays shapes in the TileDB-SOMA data model. | life sciences, single cell (soma), tutorials, python, r, shapes | 16 min |
| Share Assets | Sharing assets under a zero-trust permission model maeks sure assets are shared only with those who need them. | collaborate, access control | 5 min |
| Single Sign-On | Learn about how to configure single sign-on for use with TileDB Cloud Self-hosted. | administration, single sign-on (sso) | 1 min |
| Single-Cell | Learn how TileDB helps you manage and analyze single-cell genomics data. | life sciences, single cell (soma) | 1 min |
| Single-Cell (SOMA) | TileDB is an ideal solution for managing, structuring, and analyzing single-cell data | single cell (soma), catalog | 7 min |
| Single-Cell API Reference | This section contains the full list of APIs built and supported by TileDB-SOMA. | life sciences, single cell (soma), reference | 1 min |
| Single-Cell Data Ingestion | Learn how to ingest single-cell data with TileDB-SOMA. | life sciences, single cell (soma), tutorials, python, r, ingestion | 6 min |
| Single-Cell Data Model | This page covers the basics of the SOMA data model, including the expression matrix, cell annotations, and gene annotations. | life sciences, single cell (soma), foundation, data model | 5 min |
| Single-Cell Foundation | Learn about the fundamental concepts underlying TileDB-SOMA. | life sciences, foundation, single cell (soma) | 1 min |
| Single-Cell Key Concepts | The key concepts behind TileDB’s single-cell technology that can make you a power user. | life sciences, foundation, single cell (soma) | 1 min |
| Single-Cell Quickstart | Learn how to install the TileDB-SOMA API to start working with SOMA experiments containing single-cell data. | life sciences, single cell (soma), quickstart, tutorials, python, r | 4 min |
| Single-Cell Tutorials | Learn about how to work with TileDB-SOMA and single-cell data. | tutorials, life sciences, single cell (soma) | 1 min |
| Slice Data | Learn how serverless slicing allows rapid analysis. | analyze | 1 min |
| Sparse Array Deletions | You can delete data in a sparse array, and you can time travel across deletions. | arrays, foundation, deletions, sparse | 2 min |
| Spatial | Learn about TileDB-SOMA’s support for spatial omics data. | life sciences, single cell (soma), spatial | 1 min |
| Spatial Data Ingestion | Learn how to ingest 10X Visium Space Ranger data with TileDB-SOMA. | life sciences, single cell (soma), spatial, tutorials, ingestion | 3 min |
| Spatial Data Model | This page covers the spatial additions to the core SOMA data model, including scenes, point cloud dataframes, geometry dataframes, and multiscale images. | life sciences, single cell (soma), spatial, data model, foundation | 3 min |
| Spatial Tutorials | Learn how to use TileDB-SOMA with spatial datasets. | life sciences, single cell (soma), spatial, tutorials | 1 min |
| Split VCF | Split multi-level VCF files for compatibility with TileDB-VCF ingestion. | life sciences, genomics (vcf), tutorials, ingestion | 3 min |
| State Management | Learn about TileDB-SOMA’s stateful API. | life sciences, single cell (soma), foundation, state management | 2 min |
| Storage | Learn about the internal mechanics of TileDB arrays and groups, as well as the architectural decisions behind the storage format spec. | arrays, foundation | 1 min |
| Storage Paths | You can define default paths to store your TileDB Cloud assets in your cloud storage provider. | accounts | 3 min |
| Storage Paths | You can define default paths to store your TileDB Cloud assets in your cloud storage provider. | accounts, organization admins, administration | 1 min |
| Storage Paths | You can view default paths set by your orgnanization admins. These paths store TileDB Cloud assets in your cloud storage provider. | accounts, organization members | 1 min |
| Storage of ML Models | TileDB offers several advantages for organizations using ML models through its model registry. | ai/ml, machine learning (ml), foundation, storage | 3 min |
| Streamlit | Learn how to build Streamlit dashboards in TileDB with Python. | analyze, dashboards, streamlit | 2 min |
| String Dimensions | TileDB sparse arrays support the use of string dimensions. Learn how to work with string dimensions effectively in this tutorial. | arrays, tutorials, python, r, dimensions | 1 min |
| Structure | TileDB brings structure to a broad spectrum of data modalities across multiple industries for extreme performance. | structure | 1 min |
| Summary of Factors | A condensed list of the most important performance factors of TileDB. | 11 min | |
| Tables | Learn how to catalog your tables in TileDB. | catalog, tables | 1 min |
| Tables | Learn how TileDB efficiently handles tabular data. | tables | 1 min |
| Tables API Reference | This section contains the list of APIs built and supported by TileDB for tables. | reference, tables | 10 min |
| Tables Compression | TileDB achieves effective compression via its columnar format. | foundation, tables, compression | 1 min |
| Tables Data Model | Learn about how tables are modeled as multi-dimensional arrays in TileDB. | foundation, tables, data model | 2 min |
| Tables Foundation | Learn about the data model and internal mechanics of TileDB’s tabular offering. | tables, foundation | 1 min |
| Tables Key Concepts | Learn the key concepts behind the TileDB tabular support. | tables, foundation | 1 min |
| Tables Quickstart | This tutorial covers the basics of working with tabular data using TileDB. | tables, quickstart, tutorials, python | 3 min |
| Tables Tutorials | This section contains hands-on tutorials for working with tabular data. | tutorials, tables | 1 min |
| Tables and SQL | Learn about TileDB’s tabular and SQL capabilities for genomic data. | life sciences, genomics (vcf), foundation, tables, sql | 1 min |
| Tables and SQL Tutorial | Learn how to query tabular variant data and leverage the power of SQL. | life sciences, genomics (vcf), tutorials, tables, sql | 3 min |
| Tables: Scalable Ingestion | This page includes a demonstration of distributed table ingestion on TileDB. | tutorials, tables, ingestion | 3 min |
| Tables: Scalable Queries | Demonstration distributed queries on TileDB Cloud. | tutorials, tables, queries | 2 min |
| Task Graph Assets | Description of TileDB catalog features for task graphs. | task graphs, catalog | 5 min |
| Task Graph Log | You can view all details related to a task graph by navigating to the Task Graph Log. | analyze, task graphs, monitor, logging | 3 min |
| Task Graphs | Task graphs provide scalable, distributed computations in TileDB Cloud. | analyze, task graphs | 1 min |
| Task Graphs | Task graphs provide scalable distributed computations in TileDB Cloud. | analyze, task graphs, scalable compute | 2 min |
| Task Log | TileDB Cloud logs details about all tasks executed in the system. | analyze, python, tasks, monitor, logging | 6 min |
| The N+1 Problem | The N+1 problem in population genomics and how TileDB-VCF solves it. | life sciences, genomics (vcf), foundation | 5 min |
| Tile Filters | Tile filters transform your data on disk for the purposes of saving space, encrypting your data, and more. | arrays, foundation, tile filters | 15 min |
| TileDB Academy | TileDB Academy is the source of all TileDB product documentation and tutorials. | about | 1 min |
| TileDB Cloud URIs with Single Cell Data | Learn about the TileDB Cloud URI scheme and how to use it to interact with SOMA datasets. | life sciences, single cell (soma), foundation | 3 min |
| TileDB Vector Search | Learn about the basics of vector search and why TileDB is the right fit for vector search workflows. | ai/ml, vector search | 1 min |
| TileDB-VCF Architecture | How TileDB-VCF is architected and the general population genomics workflow | life sciences, genomics (vcf), foundation, architecture | 3 min |
| TileDB-VCF Storage Format Spec | The storage format specification of TileDB-VCF. | life sciences, genomics (vcf), foundation, storage format spec | 24 min |
| TileDB-Vector-Search Architecture | This section describes the software stack of the TileDB vector search functionality | ai/ml, vector search, foundation, architecture | 3 min |
| TileDB-Vector-Search Storage Format Spec | Learn about the vector search storage format specification for different indexing algorithms. | ai/ml, vector search, foundation, storage format spec | 1 min |
| Tiles | A tile is a group of cells and is the atomic unit of I/O and compression in TileDB arrays. | arrays, foundation, tiling | 5 min |
| Tiling and Data Layout | Choosing tiling and data layout is critical for maximum array performance. Learn about those strategies here. | arrays, foundation, performance, tiling, data layout | 4 min |
| Time Travel across Fragments | Learn how to time travel across different write operations on your arrays. | arrays, tutorials, python, r, time traveling, fragments | 3 min |
| Time Travel through Array Metadata | You can time travel on array metadata as you would with fragments. Learn how in this tutorial. | arrays, tutorials, python, r, time traveling, array metadata | 2 min |
| Tuning Reads | Learn about the factors to consider when tuning the performance during TileDB array reads. | arrays, foundation, performance, reads | 2 min |
| Tuning Writes | Learn how to improve write performance through choosing the appropriate write layout, consolidating fragments, and utilizing TileDB Cloud’s distributed compute. | arrays, tutorials, performance, writes | 4 min |
| Tutorial: Distributed Compute with Arrays | Task graphs are a powerful feature of TileDB, allowing you to distribute work across numerous machines in a parallel, serverless manner. | arrays, tutorials, python, scalable compute | 3 min |
| Update Vector Index Data | You can update vector data using TileDB-Vector-Search, either single vectors or multiple vectors in a batch. | ai/ml, vector search, tutorials, updates | 2 min |
| Upgrades | This page contains an overview of how to perform TileDB Cloud Self-hosted upgrades. | administration | 1 min |
| Usage | This section teaches you how to use TileDB notebooks. | analyze, notebooks | 4 min |
| Use Datetimes with TileDB Arrays | Learn how to work with datetimes in TileDB arrays, including writing and reading datetime data. | arrays, tutorials, python, r, datetimes | 1 min |
| Use Distributed Compute with SOMA Datasets | Learn how to leverage TileDB Cloud’s serverless capabilities to perform distributed operations on single-cell data. | life sciences, single cell (soma), tutorials, python, scalable compute | 8 min |
| Use Distributed Compute with Vector Index Data | Demonstration of TileDB-Vector-Search distributed execution capabilities. | ai/ml, vector search, tutorials, scalable compute | 3 min |
| Use User-Defined Functions with Array Data | User-defined functions give you the ability to run code inside the secure infrastructure of TileDB. | arrays, tutorials, python, user-defined functions | 4 min |
Use fromDataFrame() to Create Arrays with TileDB-R
|
With the TileDB-R API, you can create a TileDB array from a data.frame object by using the fromDataFrame function.
|
tutorials, arrays, r, reads, writes | 3 min |
| Use of Apache Arrow | Learn about the Apache Arrow data types used in SOMA and how to work with them. | life sciences, single cell (soma), foundation, python, r, apache arrow | 3 min |
| User-Defined Functions | Scale your code effortlessly with TileDB user-defined functions. | analyze, user-defined functions | 4 min |
| User-Defined Functions | Learn how TileDB allows you to catalog and manage your user-defined functions. | user-defined functions, catalog | 5 min |
| User-Defined Functions and Arrays | User-defined functions give you the ability to run code inside the secure infrastructure of TileDB Cloud. | arrays, foundation, user-defined functions | 1 min |
| User-Defined Functions and VCF Datasets | A flexible way to create custom analysis on variant data. | life sciences, genomics (vcf), foundation, user-defined functions | 1 min |
| User-Defined Functions with Biomedical Imaging | A flexible way to create custom analysis on variant data. | life sciences, biomedical imaging, user-defined functions, foundation | 1 min |
| VCF Command Line Interface | life sciences, genomics (vcf), reference | 25 min | |
| VCF Data Ingestion | How TileDB is used to efficiently load VCF data into a TileDB-VCF dataset with optimized read performance. | life sciences, genomics (vcf), foundation, ingestion | 8 min |
| VCF Dataset Reads | Key concepts for reading variant data stored in a TileDB-VCF dataset. | life sciences, genomics (vcf), foundation, reads | 3 min |
| Vacuum Consolidated Array Data | Vacuuming is necessary after consolidation to guarantee maximum read performance. | tutorials, arrays, vacuuming | 1 min |
| Vacuum Consolidated Array Metadata | Learn how to vacuum array metadata after array metadata consolidation. | arrays, tutorials, python, r, vacuuming, array metadata | 2 min |
| Vacuum Consolidated Commits | Learn how to vacuum commits after commit consolidation. | arrays, tutorials, python, r, vacuuming, commits | 2 min |
| Vacuum Consolidated Fragment Metadata | Learn how to vacuum fragment metadata after fragment metadata consolidation. | arrays, tutorials, python, r, fragment metadata, vacuuming | 3 min |
| Vacuum Consolidated Fragments | Learn how to vacuum fragments after fragment consolidation. | arrays, tutorials, python, r, vacuuming, fragments | 2 min |
| Vacuuming | Vacuuming permanently deletes consolidated files to clean up space and boost performance, at the cost of time traveling granularity. | arrays, foundation, vacuuming | 2 min |
| Variable-Length Attributes | TileDB supports attributes of variable length, including lists of basic datatypes and string attributes. | arrays, tutorials, python, r, attributes | 2 min |
| Variant Statistics | Variant statistics provided by TileDB-VCF. | life sciences, genomics (vcf), foundation, statistics | 6 min |
| Variant Statistics Tutorial | Learn about using allele frequency and sample quality control metrics in TileDB-VCF. | life sciences, genomics (vcf), tutorials, statistics | 2 min |
| Vector Databases | Learn what a vector database is and how TileDB differs from them. | ai/ml, vector search, foundation | 4 min |
| Vector Index Updates | Learn about TileDB-Vector-Search support for updates. | ai/ml, vector search, foundation, updates | 3 min |
| Vector Indexing Algorithms | Learn about the vector search algorithms supported by TileDB: FLAT, IVF_FLAT, and VAMANA. | ai/ml, vector search, foundation, algorithms | 3 min |
| Vector Search | Learn the theoretical background of vector search. | ai/ml, vector search, foundation | 8 min |
| Vector Search API Reference | This offers a comprehensive description of the TileDB-Vector-Search APIs. | ai/ml, vector search, reference | 1 min |
| Vector Search Data Model | Learn about the vector search data model in TileDB. | ai/ml, vector search, foundation, data model | 6 min |
| Vector Search Foundation | This section includes the foundation on TileDB vector search, such as the data model, key concepts and the storage format specification. | ai/ml, foundation, vector search | 1 min |
| Vector Search Indices | Learn how TileDB catalogs indexes for vector search. | vector search, catalog | 7 min |
| Vector Search Key Concepts | This section contains key concepts on the TileDB vector search functionality that will help you become a power user and maximize the value you get from TileDB. | ai/ml, foundation, vector search | 1 min |
| Vector Search Performance | Learn about the trade-offs between speed and accuracy when using TileDB-Vector-Search. | ai/ml, vector search, tutorials, performance | 10 min |
| Vector Search Quickstart | Learn how to install TileDB-Vector-Search, build an index, and perform basic searches with this guided tutorial. | ai/ml, vector search, quickstart, tutorials, python | 2 min |
| Vector Search Tutorials | A catalog of guided tutorials for working with TileDB-Vector-Search. | tutorials, ai/ml, vector search | 1 min |
| Vector Search: Distributed Compute | Learn how you can leverage TileDB to perform scalable ingestion and search on vectors. | ai/ml, vector search, foundation, scalable compute | 2 min |
| Vector Search: Time Traveling | Each update and deletion creates an index version in TileDB-Vector-Search, and you can time travel over these versions. | ai/ml, vector search, tutorials, time traveling | 3 min |
| Version Vector Search Data | You can version vector data in TileDB-Vector-Search as you perform updates and deletes. | ai/ml, vector search, tutorials, versioning | 2 min |
| Virtual Filesystem | TileDB’s virtual filesystem (VFS) abstracts all I/O operations to storage backends behind a unified interface, supporting powerful file and directory management. | 6 min | |
| What is TileDB? | TileDB is a data platform that enables organizations to gain scientific insights from all their structured and unstructured data. | about | 9 min |
| Why Structure Is Important | Learn how TileDB identifies structure in all data with arrays, offering unprecedented performance. | structure | 8 min |
| Why TileDB for Machine Learning | TileDB meets or exceeds each requirement for finding a standard dataset format for Machine Learning. | ai/ml, machine learning (ml), foundation | 4 min |
| Widgets | Learn how to use Jupyter widgets within TileDB notebooks and dashboards. | analyze, notebooks | 1 min |
| Work with Configuration Objects | Learn how to perform various operations on TileDB configuration objects. | arrays, tutorials, python, r, configuration | 21 min |
| Work with the Palmer Penguins Dataset and TileDB-R |
With the TileDB-R API, you can create a TileDB array from a data.frame object by using the fromDataFrame function. This tutorial shows how to do this with the Palmer Penguins dataset.
|
tutorials, arrays, r, reads, writes | 1 min |
| Write at a Timestamp | Writing data at a timestamp is particularly useful for versioning data and time traveling. | arrays, tutorials, python, r, writes | 2 min |
| Writes | Learn about writing data to TileDB arrays in this section. | arrays, foundation, writes | 5 min |
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