1. Analyze
  2. User-Defined Functions
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  • Glossary

On this page

  • Generic UDFs
  • Array UDFs
  • Run a UDF by URI
  • Multi-Array UDFs
  • Registered UDFs
  • Resource classes
  • UDF images
  1. Analyze
  2. User-Defined Functions

User-Defined Functions

analyze
user-defined functions
Scale your code effortlessly with TileDB user-defined functions.

TileDB provides effortless scalability for Python and R code using serverless user-defined functions (UDFs). UDFs come in three types:

  • Generic: run any Python function at scale with arbitrary input arguments.
  • Single-array: apply a function to a predefined slice of a TileDB array.
  • Multi-array: UDFs that can be applied to any number of arrays.

Generic UDFs

Generic UDFs take any Python or R code and run the code on a fully-managed, automatically-provisioned node. After function completion, TileDB automatically returns the results to the caller.

To run a generic UDF, first define a function, then execute it with TileDB’s exec functionality:

  • Python
def get_remote_time():
    import datetime

    return (
        datetime.datetime.now(datetime.timezone.utc)
        .astimezone()
        .strftime("%Y-%m-%d %H:%M:%S %Z%z")
    )


remote_time = tiledb.cloud.udf.exec(get_remote_time)
print(remote_time)
2024-10-07 14:51:57 UTC+0000

The UDF execution environment timezone is UTC, so for many users, the result of the function above should be offset from your local time, because the function is executed remotely.

For Python, note that the function passed in to exec must not be called directly within the exec invocation. For example, tiledb.cloud.udf.exec( get_remote_time() ) will error out (try it!) because it will pass the result of get_remote_time() (executed locally) to the exec function, which expects a callable object.

Important

Note that UDFs are completely stateless: the UDF process only exists for the duration of execution, and any changes will not be visible during subsequent execution runs. For example, changes to a local path, such as installing a package or writing to a file, will completely disappear on the next run.

Array UDFs

Unlike generic UDFs, array UDFs are run against a specific array, and a specific slice of that array. Similar to the TileDB Python API, the input is an OrderedDict of results after applying the given array slice. To run an array UDF, the following steps are required:

  • Define a function which takes a NumPy array as the only argument.
  • Open the target array.
  • Call a.apply(fn, range).

For example, you can apply the NumPy median function to a TileDB array as follows:

  • Python
# Define the UDF
# The input is the array slice results as an OrderedDict
def median(data):
    import numpy

    return numpy.median(data["a"])


# The "apply" function takes as input the function, an array slice
# and any attribute subset, and passes to the function the result of
# that TileDB query, i.e., A.query(attrs=["a"])[1:2, 1:2]
with tiledb.open("tiledb://TileDB-Inc/quickstart_dense") as A:
    results = A.apply(median, [(1, 2), (1, 2)], attrs=["a"])
    print(results)
3.5

Run a UDF by URI

Alternatively, you may run an array UDF directly by URI, without first opening the array locally. To do this, pass a valid array URI as the first argument to tiledb.cloud.udf.exec, then a function handle, then any optional arguments.

  • Python
tiledb.cloud.array.apply(
    "tiledb://TileDB-Inc/quickstart_dense",
    median,
    [[(1, 2)], [slice(1, 2)]],
    attrs=["a"],
)
3.5

Multi-Array UDFs

Multi-array UDFs let you apply a function on a list of arrays, which specifies the array name, subarray on which to apply the UDF, and a subset of array attributes. This can be useful for performing join operations, data fusion, and much more.

  • Python
array_1 = "tiledb://TileDB-Inc/quickstart_sparse"
array_2 = "tiledb://TileDB-Inc/quickstart_dense"


def median(data):
    import numpy

    # When you have multiple arrays, the parameter
    # we pass in is a list of ordered dictionaries.
    # The list is in the order of the arrays you asked for.
    return (
        # perform a median over both arrays
        numpy.median(
            numpy.concatenate((data[0]["a"].flatten(), data[1]["a"].flatten()))
        )
    )


# The following will create the list of arrays to take part
# in the multi-array UDF. Each has as input the array name,
# a multi-index for slicing and a list of attributes to subselect on.
array_list = tiledb.cloud.array.ArrayList()
array_list.add(array_1, [(1, 4), (1, 4)], ["a"])
array_list.add(array_2, [(1, 2), (1, 4)], ["a"])

# This will execute `median` using as input the result of the
# slicing and attribute subselection for each of the arrays
# in `array_list`
result = tiledb.cloud.array.exec_multi_array_udf(median, array_list)

print(result)
3.0

Registered UDFs

You may also register UDFs within the catalog for sharing and reuse within the same framework as all other assets. To create a registered UDF, first define a function taking zero or more arguments. Then call tiledb.cloud.udf.register_generic_udf, passing the (unquoted) function name as the first argument.

  • Python
def mymedian(vals):
    import numpy

    return numpy.median(vals)


tiledb.cloud.udf.register_generic_udf(mymedian, name="my_median", namespace=namespace)

A registered UDF may be executed with tiledb.cloud.exec, passing the <namespace>/<UDF name> to run, and, optionally, any arguments:

  • Python
import numpy as np

tiledb.cloud.udf.exec(f"{namespace}/my_median", np.arange(10))
4.5

Finally, a registered UDF may be deleted with tiledb.cloud.udf.delete:

  • Python
tiledb.cloud.udf.delete(f"tiledb://{namespace}/my_median")
Note

The function tiledb.cloud.udf.deregister is also available. However, it will only un-catalog but not remove the UDF’s backing data from storage. Therefore, re-registering a UDF with the same name and default locations will fail unless the UDF data is manually removed from the backing object store (e.g. Amazon S3).

Resource classes

TileDB offers two resource classes available for UDF execution: Standard (default) and Large. The following table lists the capacity levels for each class:

Class Capacity
Standard 2 CPUs, 2 GB RAM
Large 8 CPUs, 8 GB RAM

You can set the Large resource class by passing resource_class="large" to any UDF exec* function:

result = tiledb.cloud.array.exec_multi_array_udf(
    median, array_list, resource_class="large"
)

print(result)
3.0

UDF images

TileDB offers the following Python images for use with UDFs:

  • default (default)
  • genomics
  • geo
  • imaging-dev
  • vectorsearch

You can set the UDF image by passing image_name="<image_name>" to any UDF exec* function:

result = tiledb.cloud.array.exec_multi_array_udf(
    median, array_list, image_name="vectorsearch"
)

print(result)
3.0

TileDB also offers a UDF image for R. You can view a list of dependencies for each image here:

  • Python
  • R
  • default
  • genomics
  • geo
  • imaging-dev
  • vectorsearch
Dependencies
Package Version Build Channel
_libgcc_mutex 0.1 conda_forge conda-forge
_openmp_mutex 4.5 2_kmp_llvm conda-forge
absl-py 1.4.0 pyhd8ed1ab_0 conda-forge
aiobotocore 2.15.2 pyhd8ed1ab_0 conda-forge
aiohappyeyeballs 2.4.3 pyhd8ed1ab_0 conda-forge
aiohttp 3.11.6 py39h9399b63_0 conda-forge
aioitertools 0.12.0 pyhd8ed1ab_0 conda-forge
aiosignal 1.3.1 pyhd8ed1ab_0 conda-forge
alsa-lib 1.2.13 hb9d3cd8_0 conda-forge
anndata 0.10.9 pyhd8ed1ab_0 conda-forge
array-api-compat 1.9.1 pyhd8ed1ab_0 conda-forge
asn1crypto 1.5.1 pyhd8ed1ab_0 conda-forge
astunparse 1.6.3 pyhd8ed1ab_2 conda-forge
async-timeout 5.0.1 pyhd8ed1ab_0 conda-forge
attr 2.5.1 h166bdaf_1 conda-forge
attrs 24.2.0 pyh71513ae_0 conda-forge
aws-c-auth 0.7.3 h28f7589_1 conda-forge
aws-c-cal 0.6.1 hc309b26_1 conda-forge
aws-c-common 0.9.0 hd590300_0 conda-forge
aws-c-compression 0.2.17 h4d4d85c_2 conda-forge
aws-c-event-stream 0.3.1 h2e3709c_4 conda-forge
aws-c-http 0.7.11 h00aa349_4 conda-forge
aws-c-io 0.13.32 he9a53bd_1 conda-forge
aws-c-mqtt 0.9.3 hb447be9_1 conda-forge
aws-c-s3 0.3.14 hf3aad02_1 conda-forge
aws-c-sdkutils 0.1.12 h4d4d85c_1 conda-forge
aws-checksums 0.1.17 h4d4d85c_1 conda-forge
aws-crt-cpp 0.21.0 hb942446_5 conda-forge
aws-sdk-cpp 1.10.57 h85b1a90_19 conda-forge
awscli 1.35.2 py39hf3d152e_0 conda-forge
bcftools 1.20 h8b25389_1 bioconda
bedtools 2.31.1 hf5e1c6e_2 bioconda
blas 2.125 openblas conda-forge
blas-devel 3.9.0 25_linux64_openblas conda-forge
blinker 1.9.0 pyhff2d567_0 conda-forge
blosc 1.21.5 h0f2a231_0 conda-forge
boto3 1.35.36 pyhd8ed1ab_0 conda-forge
botocore 1.35.36 pyge38_1234567_0 conda-forge
brotli 1.0.9 h166bdaf_9 conda-forge
brotli-bin 1.0.9 h166bdaf_9 conda-forge
brotlipy 0.7.0 py39h27cfd23_1003 pkgs/main
bzip2 1.0.8 h4bc722e_7 conda-forge
c-ares 1.33.1 heb4867d_0 conda-forge
c-blosc2 2.15.1 hc57e6cf_0 conda-forge
ca-certificates 2024.8.30 hbcca054_0 conda-forge
cached-property 1.5.2 hd8ed1ab_1 conda-forge
cached_property 1.5.2 pyha770c72_1 conda-forge
cachetools 5.5.0 pyhd8ed1ab_0 conda-forge
cairo 1.18.0 h3faef2a_0 conda-forge
cellxgene-census 1.15.0 pyh4471522_2 tiledb
certifi 2024.8.30 pyhd8ed1ab_0 conda-forge
cffi 1.17.1 py39h15c3d72_0 conda-forge
chardet 4.0.0 py39h06a4308_1003 pkgs/main
charset-normalizer 3.4.0 pyhd8ed1ab_0 conda-forge
click 8.1.7 unix_pyh707e725_0 conda-forge
cloudpickle 2.2.1 pyhd8ed1ab_0 conda-forge
cmake 3.30.3 hf9cb763_0 conda-forge
colorama 0.4.6 pyhd8ed1ab_0 conda-forge
conda 4.10.3 py39hf3d152e_4 conda-forge
conda-package-handling 1.7.3 py39h27cfd23_1 pkgs/main
contourpy 1.3.0 py39h74842e3_2 conda-forge
cpp-expected 1.1.0 hf52228f_0 conda-forge
cryptography 42.0.8 py39h8169da8_0 conda-forge
cycler 0.12.1 pyhd8ed1ab_0 conda-forge
cytoolz 1.0.0 py39h8cd3c5a_1 conda-forge
dask-core 2024.8.0 pyhd8ed1ab_0 conda-forge
dbus 1.13.6 h5008d03_3 conda-forge
deprecated 1.2.15 pypi_0 pypi
dill 0.3.9 pyhd8ed1ab_0 conda-forge
dm-tree 0.1.8 py39h45438f2_0 conda-forge
docutils 0.16 py39hf3d152e_5 conda-forge
efficientnet-pytorch 0.7.1 pyhd8ed1ab_1 conda-forge
eigen 3.2 3 bioconda
etils 1.5.1 pyhd8ed1ab_1 conda-forge
exceptiongroup 1.2.2 pyhd8ed1ab_0 conda-forge
expat 2.6.4 h5888daf_0 conda-forge
faiss 1.8.0 py39h1df3c28_1_cpu conda-forge
faiss-cpu 1.8.0 h718b53a_1 conda-forge
fftw 3.3.10 nompi_hf1063bd_110 conda-forge
filelock 3.16.1 pyhd8ed1ab_0 conda-forge
flatbuffers 23.5.26 h59595ed_1 conda-forge
fmt 9.1.0 h924138e_0 conda-forge
font-ttf-dejavu-sans-mono 2.37 hab24e00_0 conda-forge
font-ttf-inconsolata 3.000 h77eed37_0 conda-forge
font-ttf-source-code-pro 2.038 h77eed37_0 conda-forge
font-ttf-ubuntu 0.83 h77eed37_3 conda-forge
fontconfig 2.15.0 h7e30c49_1 conda-forge
fonts-conda-ecosystem 1 0 conda-forge
fonts-conda-forge 1 0 conda-forge
fonttools 4.55.0 py39h9399b63_0 conda-forge
freetype 2.12.1 h267a509_2 conda-forge
frozenlist 1.5.0 py39h8cd3c5a_0 conda-forge
fsspec 2024.10.0 pyhff2d567_0 conda-forge
gast 0.4.0 pyh9f0ad1d_0 conda-forge
geos 3.13.0 h5888daf_0 conda-forge
get-annotations 0.1.2 pyhd8ed1ab_0 conda-forge
gettext 0.22.5 he02047a_3 conda-forge
gettext-tools 0.22.5 he02047a_3 conda-forge
gflags 2.2.2 h5888daf_1005 conda-forge
giflib 5.2.2 hd590300_0 conda-forge
git-lfs 3.6.0 h647637d_0 conda-forge
glib 2.82.2 h44428e9_0 conda-forge
glib-tools 2.82.2 h4833e2c_0 conda-forge
glog 0.6.0 h6f12383_0 conda-forge
google-auth 2.36.0 pyhff2d567_0 conda-forge
google-auth-oauthlib 1.0.0 pyhd8ed1ab_1 conda-forge
google-pasta 0.2.0 pyhd8ed1ab_1 conda-forge
googleapis-common-protos 1.66.0 pyhff2d567_0 conda-forge
graphite2 1.3.13 h59595ed_1003 conda-forge
grpcio 1.54.3 py39h227be39_0 conda-forge
gsl 2.7 he838d99_0 conda-forge
gst-plugins-base 1.22.9 hfa15dee_1 conda-forge
gstreamer 1.22.9 h98fc4e7_1 conda-forge
h5py 3.12.1 nompi_py39h30a5a8d_102 conda-forge
harfbuzz 8.5.0 hfac3d4d_0 conda-forge
hdf5 1.14.3 nompi_hdf9ad27_105 conda-forge
hnswlib 0.7.0 py39hf59e57a_5 conda-forge
htslib 1.20 h18253b1_2 tiledb
icu 73.2 h59595ed_0 conda-forge
idna 2.10 pyhd3eb1b0_0 pkgs/main
imagecodecs-lite 2019.12.3 py39hd92a3bb_8 conda-forge
imageio 2.36.0 pyh12aca89_1 conda-forge
importlib-metadata 8.5.0 pyha770c72_0 conda-forge
importlib-resources 6.4.5 pyhd8ed1ab_0 conda-forge
importlib_metadata 8.5.0 hd8ed1ab_0 conda-forge
importlib_resources 6.4.5 pyhd8ed1ab_0 conda-forge
jaeger-client 4.8.0 pypi_0 pypi
jax 0.4.27 pyhd8ed1ab_0 conda-forge
jaxlib 0.4.23 py39h6a678d5_1 pkgs/main
jmespath 1.0.1 pyhd8ed1ab_0 conda-forge
joblib 1.4.2 pyhd8ed1ab_0 conda-forge
keras 2.12.0 pyhd8ed1ab_0 conda-forge
keras-applications 1.0.8 py_1 conda-forge
keras-preprocessing 1.1.2 pyhd8ed1ab_0 conda-forge
keyutils 1.6.1 h166bdaf_0 conda-forge
kiwisolver 1.4.7 py39h74842e3_0 conda-forge
krb5 1.21.3 h659f571_0 conda-forge
lame 3.100 h166bdaf_1003 conda-forge
lcms2 2.15 h7f713cb_2 conda-forge
ld_impl_linux-64 2.43 h712a8e2_1 conda-forge
legacy-api-wrap 1.4 pyhd8ed1ab_1 conda-forge
lerc 4.0.0 h27087fc_0 conda-forge
libabseil 20230125.3 cxx17_h59595ed_0 conda-forge
libaec 1.1.3 h59595ed_0 conda-forge
libarchive 3.6.2 h039dbb9_1 conda-forge
libarrow 12.0.1 hb87d912_8_cpu conda-forge
libasprintf 0.22.5 he8f35ee_3 conda-forge
libasprintf-devel 0.22.5 he8f35ee_3 conda-forge
libblas 3.9.0 25_linux64_openblas conda-forge
libbrotlicommon 1.0.9 h166bdaf_9 conda-forge
libbrotlidec 1.0.9 h166bdaf_9 conda-forge
libbrotlienc 1.0.9 h166bdaf_9 conda-forge
libcap 2.69 h0f662aa_0 conda-forge
libcblas 3.9.0 25_linux64_openblas conda-forge
libclang 15.0.7 default_h127d8a8_5 conda-forge
libclang13 15.0.7 default_h5d6823c_5 conda-forge
libcrc32c 1.1.2 h9c3ff4c_0 conda-forge
libcups 2.3.3 h4637d8d_4 conda-forge
libcurl 8.9.1 hdb1bdb2_0 conda-forge
libdeflate 1.19 hd590300_0 conda-forge
libedit 3.1.20191231 he28a2e2_2 conda-forge
libev 4.33 hd590300_2 conda-forge
libevent 2.1.12 hf998b51_1 conda-forge
libexpat 2.6.4 h5888daf_0 conda-forge
libfaiss 1.8.0 h0ce047f_1_cpu conda-forge
libffi 3.4.2 h7f98852_5 conda-forge
libflac 1.4.3 h59595ed_0 conda-forge
libgcc 14.2.0 h77fa898_1 conda-forge
libgcc-ng 14.2.0 h69a702a_1 conda-forge
libgcrypt 1.11.0 h4ab18f5_1 conda-forge
libgettextpo 0.22.5 he02047a_3 conda-forge
libgettextpo-devel 0.22.5 he02047a_3 conda-forge
libgfortran 14.2.0 h69a702a_1 conda-forge
libgfortran-ng 14.2.0 h69a702a_1 conda-forge
libgfortran5 14.2.0 hd5240d6_1 conda-forge
libglib 2.82.2 h2ff4ddf_0 conda-forge
libgomp 14.2.0 h77fa898_1 conda-forge
libgoogle-cloud 2.12.0 hac9eb74_1 conda-forge
libgpg-error 1.51 hbd13f7d_1 conda-forge
libgrpc 1.54.3 hb20ce57_0 conda-forge
libhwloc 2.11.1 default_hecaa2ac_1000 conda-forge
libiconv 1.17 hd590300_2 conda-forge
libitk 5.3.0 h0dad300_7 conda-forge
libjpeg-turbo 2.1.5.1 hd590300_1 conda-forge
liblapack 3.9.0 25_linux64_openblas conda-forge
liblapacke 3.9.0 25_linux64_openblas conda-forge
libllvm14 14.0.6 hcd5def8_4 conda-forge
libllvm15 15.0.7 hb3ce162_4 conda-forge
libmamba 1.1.0 hde2b089_3 conda-forge
libmambapy 1.1.0 py39hf0aba66_3 conda-forge
libnghttp2 1.58.0 h47da74e_1 conda-forge
libnsl 2.0.1 hd590300_0 conda-forge
libnuma 2.0.18 h4ab18f5_2 conda-forge
libogg 1.3.5 h4ab18f5_0 conda-forge
libopenblas 0.3.28 pthreads_h94d23a6_1 conda-forge
libopus 1.3.1 h7f98852_1 conda-forge
libpng 1.6.44 hadc24fc_0 conda-forge
libpq 15.8 h3a3aac9_1 conda-forge
libprotobuf 3.21.12 hfc55251_2 conda-forge
libsndfile 1.2.2 hc60ed4a_1 conda-forge
libsolv 0.7.30 h3509ff9_0 conda-forge
libsqlite 3.46.1 hadc24fc_0 conda-forge
libssh2 1.11.0 h0841786_0 conda-forge
libstdcxx 14.2.0 hc0a3c3a_1 conda-forge
libstdcxx-ng 14.2.0 h4852527_1 conda-forge
libsystemd0 256.7 h2774228_1 conda-forge
libthrift 0.18.1 h8fd135c_2 conda-forge
libtiff 4.6.0 h29866fb_1 conda-forge
libtiledbsoma 1.15.0rc1 hd1a9fd6_0 tiledb/label/rc
libtiledbvcf 0.35.0 h53fe7cb_0 tiledb
libutf8proc 2.8.0 h166bdaf_0 conda-forge
libuuid 2.38.1 h0b41bf4_0 conda-forge
libuv 1.49.2 hb9d3cd8_0 conda-forge
libvorbis 1.3.7 h9c3ff4c_0 conda-forge
libwebp-base 1.4.0 hd590300_0 conda-forge
libxcb 1.15 h0b41bf4_0 conda-forge
libxcrypt 4.4.36 hd590300_1 conda-forge
libxkbcommon 1.7.0 h662e7e4_0 conda-forge
libxml2 2.12.7 h4c95cb1_3 conda-forge
libzlib 1.3.1 h4ab18f5_1 conda-forge
llvm-openmp 19.1.4 h024ca30_0 conda-forge
llvmlite 0.43.0 py39hf8b6b1a_1 conda-forge
locket 1.0.0 pyhd8ed1ab_0 conda-forge
lz4-c 1.9.4 hcb278e6_0 conda-forge
lzo 2.10 hd590300_1001 conda-forge
mamba 1.1.0 py39hc5d2bb1_3 conda-forge
markdown 3.6 pyhd8ed1ab_0 conda-forge
markupsafe 3.0.2 py39h9399b63_0 conda-forge
matplotlib 3.9.1 py39hf3d152e_1 conda-forge
matplotlib-base 3.9.1 py39h0565ad7_2 conda-forge
mkl 2022.2.1 h6508926_16999 conda-forge
ml_dtypes 0.5.0 py39h3b40f6f_0 conda-forge
mpg123 1.32.9 hc50e24c_0 conda-forge
multidict 6.1.0 py39h9399b63_1 conda-forge
munkres 1.0.7 py_1 bioconda
mysql-common 8.0.33 hf1915f5_6 conda-forge
mysql-libs 8.0.33 hca2cd23_6 conda-forge
natsort 8.4.0 pyhd8ed1ab_0 conda-forge
ncurses 6.5 he02047a_1 conda-forge
networkx 3.2.1 pyhd8ed1ab_0 conda-forge
nlohmann_json 3.11.3 he02047a_1 conda-forge
nomkl 3.0 0 pkgs/main
nspr 4.36 h5888daf_0 conda-forge
nss 3.105 hd34e28f_0 conda-forge
numba 0.60.0 py39h0320e7d_0 conda-forge
numexpr 2.10.1 py39h0a7e20a_103 conda-forge
numpy 1.25.0 py39h6183b62_0 conda-forge
oauthlib 3.2.2 pyhd8ed1ab_0 conda-forge
openblas 0.3.28 pthreads_h6ec200e_1 conda-forge
openjpeg 2.5.2 h488ebb8_0 conda-forge
openssl 3.3.2 hb9d3cd8_0 conda-forge
opentelemetry-api 1.28.2 pypi_0 pypi
opentelemetry-sdk 1.28.2 pypi_0 pypi
opentelemetry-semantic-conventions 0.49b2 pypi_0 pypi
opentracing 2.4.0 pypi_0 pypi
opt-einsum 3.4.0 hd8ed1ab_0 conda-forge
opt_einsum 3.4.0 pyhd8ed1ab_0 conda-forge
orc 1.9.0 h2f23424_1 conda-forge
packaging 24.2 pyhff2d567_1 conda-forge
pandas 1.5.3 py39h2ad29b5_1 conda-forge
partd 1.4.2 pyhd8ed1ab_0 conda-forge
patsy 1.0.1 pyhff2d567_0 conda-forge
pcre2 10.44 hba22ea6_2 conda-forge
perl 5.32.1 7_hd590300_perl5 conda-forge
pillow 10.0.1 py39h444a776_1 conda-forge
pip 21.1.3 py39h06a4308_0 pkgs/main
pixman 0.43.2 h59595ed_0 conda-forge
platformdirs 4.3.6 pyhd8ed1ab_0 conda-forge
ply 3.11 pyhd8ed1ab_2 conda-forge
portalocker 3.0.0 py39hf3d152e_0 conda-forge
promise 2.3 py39hf3d152e_9 conda-forge
propcache 0.2.0 py39h8cd3c5a_2 conda-forge
protobuf 4.21.12 py39h227be39_0 conda-forge
psutil 6.1.0 py39h8cd3c5a_0 conda-forge
pthread-stubs 0.4 hb9d3cd8_1002 conda-forge
pulseaudio-client 16.1 hb77b528_5 conda-forge
py-cpuinfo 9.0.0 pyhd8ed1ab_0 conda-forge
pyarrow 12.0.1 py39hfbd5978_8_cpu conda-forge
pyarrow-hotfix 0.6 pyhd8ed1ab_0 conda-forge
pyasn1 0.6.1 pyhd8ed1ab_1 conda-forge
pyasn1-modules 0.4.1 pyhd8ed1ab_0 conda-forge
pybedtools 0.10.0 py39hdf45acc_2 bioconda
pybind11-abi 4 hd8ed1ab_3 conda-forge
pycosat 0.6.3 py39h27cfd23_0 pkgs/main
pycparser 2.20 py_2 pkgs/main
pyjwt 2.10.0 pyhff2d567_0 conda-forge
pynndescent 0.5.13 pyhff2d567_0 conda-forge
pyopenssl 20.0.1 pypi_0 pypi
pyparsing 3.2.0 pyhd8ed1ab_1 conda-forge
pypdf 5.1.0 pyha770c72_0 conda-forge
pyqt 5.15.9 py39h52134e7_5 conda-forge
pyqt5-sip 12.12.2 py39h3d6467e_5 conda-forge
pysam 0.22.0 py39h68d8fd3_1 tiledb
pysocks 1.7.1 py39h06a4308_0 pkgs/main
pytables 3.9.2 py39hd89fbf8_3 conda-forge
python 3.9.20 h13acc7a_1_cpython conda-forge
python-dateutil 2.9.0.post0 pyhff2d567_0 conda-forge
python-flatbuffers 24.3.25 pyh59ac667_0 conda-forge
python_abi 3.9 5_cp39 conda-forge
pytorch 1.13.1 cpu_py39h14c4022_1 conda-forge
pytz 2024.2 pyhd8ed1ab_0 conda-forge
pyu2f 0.1.5 pyhd8ed1ab_0 conda-forge
pywavelets 1.6.0 py39hd92a3bb_0 conda-forge
pyyaml 6.0.2 py39h8cd3c5a_1 conda-forge
qhull 2020.2 h434a139_5 conda-forge
qt-main 5.15.8 hc47bfe8_16 conda-forge
rdma-core 28.9 h59595ed_1 conda-forge
re2 2023.03.02 h8c504da_0 conda-forge
readline 8.2 h8228510_1 conda-forge
reproc 14.2.4.post0 hd590300_1 conda-forge
reproc-cpp 14.2.4.post0 h59595ed_1 conda-forge
requests 2.25.1 pypi_0 pypi
requests-oauthlib 2.0.0 pyhd8ed1ab_0 conda-forge
rhash 1.4.5 hb9d3cd8_0 conda-forge
rsa 4.7.2 pyh44b312d_0 conda-forge
ruamel_yaml 0.15.100 py39h27cfd23_0 pkgs/main
s2n 1.3.49 h06160fa_0 conda-forge
s3fs 2024.10.0 pyhd8ed1ab_0 conda-forge
s3transfer 0.10.4 pyhd8ed1ab_0 conda-forge
scanpy 1.10.3 pyhd8ed1ab_0 conda-forge
scikit-image 0.19.3 py39h4661b88_2 conda-forge
scikit-learn 1.5.2 py39h4b7350c_1 conda-forge
scipy 1.13.1 py39haf93ffa_0 conda-forge
seaborn 0.13.2 hd8ed1ab_2 conda-forge
seaborn-base 0.13.2 pyhd8ed1ab_2 conda-forge
session-info 1.0.0 pyhd8ed1ab_0 conda-forge
setuptools 52.0.0 py39h06a4308_0 pkgs/main
shapely 2.0.6 py39hca88cd1_2 conda-forge
simdjson 3.10.1 h84d6215_0 conda-forge
simpleitk 2.3.1 py39h3d6467e_1 conda-forge
sip 6.7.12 py39h3d6467e_0 conda-forge
six 1.16.0 pyhd3eb1b0_0 pkgs/main
sleef 3.7 h1b44611_2 conda-forge
smart-open 7.0.5 pypi_0 pypi
snappy 1.1.10 hdb0a2a9_1 conda-forge
snowflake-connector-python 3.12.2 py39h3b40f6f_1 conda-forge
somacore 1.0.20 pyh4471522_0 tiledb
sortedcontainers 2.4.0 pyhd8ed1ab_0 conda-forge
sparse 0.15.4 pypi_0 pypi
spdlog 1.11.0 h9b3ece8_1 conda-forge
sqlite 3.46.1 h9eae976_0 conda-forge
statsmodels 0.14.4 py39hf3d9206_0 conda-forge
stdlib-list 0.11.0 pyhd8ed1ab_0 conda-forge
tbb 2021.13.0 h84d6215_0 conda-forge
tblib 1.7.0 pypi_0 pypi
tdbudf 0.0.1 pypi_0 pypi
tensorboard 2.12.3 pyhd8ed1ab_0 conda-forge
tensorboard-data-server 0.7.0 py39h7170ec2_2 conda-forge
tensorflow 2.12.1 cpu_py39h4655687_1 conda-forge
tensorflow-base 2.12.1 cpu_py39hbec7f27_1 conda-forge
tensorflow-datasets 4.8.3 pyhd8ed1ab_0 conda-forge
tensorflow-estimator 2.12.1 cpu_py39hd56b5fd_1 conda-forge
tensorflow-metadata 1.13.1 pyhd8ed1ab_0 conda-forge
termcolor 2.5.0 pyhd8ed1ab_0 conda-forge
threadloop 1.0.2 pypi_0 pypi
threadpoolctl 3.5.0 pyhc1e730c_0 conda-forge
thrift 0.21.0 pypi_0 pypi
tifffile 2020.6.3 py_0 conda-forge
tiledb 2.26.2 hde83565_0 tiledb/label/for-cloud
tiledb-cloud 0.12.31 pypi_0 pypi
tiledb-ml 0.9.6 pypi_0 pypi
tiledb-py 0.32.2 py39h067de0a_0 conda-forge
tiledbsoma-py 1.15.0rc1 py39ha4d1bf2_0 tiledb/label/rc
tiledbvcf-py 0.35.0 py39hb8eef30_0 tiledb
tk 8.6.13 noxft_h4845f30_101 conda-forge
toml 0.10.2 pyhd8ed1ab_0 conda-forge
tomli 2.1.0 pyhff2d567_0 conda-forge
tomlkit 0.13.2 pyha770c72_0 conda-forge
toolz 1.0.0 pyhd8ed1ab_0 conda-forge
torchdata 0.5.1 pyh2db4395_0 conda-forge
torchvision 0.14.1 cpu_py39h39206e8_1 conda-forge
tornado 6.4.1 py39h8cd3c5a_1 conda-forge
tqdm 4.61.2 pyhd3eb1b0_1 pkgs/main
typing-extensions 4.12.2 pypi_0 pypi
tzdata 2021a h52ac0ba_0 pkgs/main
ucx 1.14.1 h64cca9d_5 conda-forge
umap-learn 0.5.7 py39hf3d152e_0 conda-forge
unicodedata2 15.1.0 py39h8cd3c5a_1 conda-forge
urllib3 1.26.6 pyhd3eb1b0_1 pkgs/main
werkzeug 3.1.3 pyhff2d567_0 conda-forge
wheel 0.36.2 pyhd3eb1b0_0 pkgs/main
wrapt 1.16.0 py39h8cd3c5a_1 conda-forge
xarray 2024.3.0 pyhd8ed1ab_0 conda-forge
xcb-util 0.4.0 hd590300_1 conda-forge
xcb-util-image 0.4.0 h8ee46fc_1 conda-forge
xcb-util-keysyms 0.4.0 h8ee46fc_1 conda-forge
xcb-util-renderutil 0.3.9 hd590300_1 conda-forge
xcb-util-wm 0.4.1 h8ee46fc_1 conda-forge
xkeyboard-config 2.42 h4ab18f5_0 conda-forge
xorg-kbproto 1.0.7 hb9d3cd8_1003 conda-forge
xorg-libice 1.1.1 hb9d3cd8_1 conda-forge
xorg-libsm 1.2.4 he73a12e_1 conda-forge
xorg-libx11 1.8.9 h8ee46fc_0 conda-forge
xorg-libxau 1.0.11 hb9d3cd8_1 conda-forge
xorg-libxdmcp 1.1.5 hb9d3cd8_0 conda-forge
xorg-libxext 1.3.4 h0b41bf4_2 conda-forge
xorg-libxrender 0.9.11 hd590300_0 conda-forge
xorg-renderproto 0.11.1 hb9d3cd8_1003 conda-forge
xorg-xextproto 7.3.0 hb9d3cd8_1004 conda-forge
xorg-xf86vidmodeproto 2.3.1 hb9d3cd8_1005 conda-forge
xorg-xproto 7.0.31 hb9d3cd8_1008 conda-forge
xz 5.2.6 h166bdaf_0 conda-forge
yaml 0.2.5 h7b6447c_0 pkgs/main
yaml-cpp 0.7.0 h59595ed_3 conda-forge
yarl 1.17.2 py39h8cd3c5a_0 conda-forge
zipp 3.21.0 pyhd8ed1ab_0 conda-forge
zlib 1.3.1 h4ab18f5_1 conda-forge
zlib-ng 2.2.2 h5888daf_0 conda-forge
zstd 1.5.6 ha6fb4c9_0 conda-forge
Dependencies
Package Version Build Channel
_libgcc_mutex 0.1 conda_forge conda-forge
_openmp_mutex 4.5 2_kmp_llvm conda-forge
_r-mutex 1.0.1 anacondar_1 conda-forge
absl-py 1.4.0 pyhd8ed1ab_0 conda-forge
aiobotocore 2.15.2 pyhd8ed1ab_0 conda-forge
aiohappyeyeballs 2.4.3 pyhd8ed1ab_0 conda-forge
aiohttp 3.11.6 py39h9399b63_0 conda-forge
aioitertools 0.12.0 pyhd8ed1ab_0 conda-forge
aiosignal 1.3.1 pyhd8ed1ab_0 conda-forge
alsa-lib 1.2.13 hb9d3cd8_0 conda-forge
anndata 0.10.9 pyhd8ed1ab_0 conda-forge
argtable2 2.13 hd590300_1004 conda-forge
array-api-compat 1.9.1 pyhd8ed1ab_0 conda-forge
asn1crypto 1.5.1 pyhd8ed1ab_0 conda-forge
astunparse 1.6.3 pyhd8ed1ab_2 conda-forge
async-timeout 5.0.1 pyhd8ed1ab_0 conda-forge
attr 2.5.1 h166bdaf_1 conda-forge
attrs 24.2.0 pyh71513ae_0 conda-forge
aws-c-auth 0.7.3 h28f7589_1 conda-forge
aws-c-cal 0.6.1 hc309b26_1 conda-forge
aws-c-common 0.9.0 hd590300_0 conda-forge
aws-c-compression 0.2.17 h4d4d85c_2 conda-forge
aws-c-event-stream 0.3.1 h2e3709c_4 conda-forge
aws-c-http 0.7.11 h00aa349_4 conda-forge
aws-c-io 0.13.32 he9a53bd_1 conda-forge
aws-c-mqtt 0.9.3 hb447be9_1 conda-forge
aws-c-s3 0.3.14 hf3aad02_1 conda-forge
aws-c-sdkutils 0.1.12 h4d4d85c_1 conda-forge
aws-checksums 0.1.17 h4d4d85c_1 conda-forge
aws-crt-cpp 0.21.0 hb942446_5 conda-forge
aws-sdk-cpp 1.10.57 h85b1a90_19 conda-forge
awscli 1.35.2 py39hf3d152e_0 conda-forge
bcftools 1.21 h8b25389_0 bioconda
bedtools 2.31.1 hf5e1c6e_2 bioconda
binutils_impl_linux-64 2.43 h4bf12b8_1 conda-forge
blas 2.125 openblas conda-forge
blas-devel 3.9.0 25_linux64_openblas conda-forge
blast 2.16.0 hc155240_2 bioconda
blast-legacy 2.2.26 h9ee0642_4 bioconda
blinker 1.9.0 pyhff2d567_0 conda-forge
blosc 1.21.5 h0f2a231_0 conda-forge
boto3 1.35.36 pyhd8ed1ab_0 conda-forge
botocore 1.35.36 pyge38_1234567_0 conda-forge
brotli 1.0.9 h166bdaf_9 conda-forge
brotli-bin 1.0.9 h166bdaf_9 conda-forge
brotlipy 0.7.0 py39h27cfd23_1003 pkgs/main
bwa 0.7.18 he4a0461_1 bioconda
bwidget 1.9.14 ha770c72_1 conda-forge
bzip2 1.0.8 h4bc722e_7 conda-forge
c-ares 1.33.1 heb4867d_0 conda-forge
c-blosc2 2.14.4 hb4ffafa_1 conda-forge
ca-certificates 2024.8.30 hbcca054_0 conda-forge
cached-property 1.5.2 hd8ed1ab_1 conda-forge
cached_property 1.5.2 pyha770c72_1 conda-forge
cachetools 5.5.0 pyhd8ed1ab_0 conda-forge
cairo 1.18.0 h3faef2a_0 conda-forge
cellxgene-census 1.15.0 pyh4471522_2 tiledb
certifi 2024.8.30 pyhd8ed1ab_0 conda-forge
cffi 1.17.1 py39h15c3d72_0 conda-forge
chardet 4.0.0 py39h06a4308_1003 pkgs/main
charset-normalizer 3.4.0 pyhd8ed1ab_0 conda-forge
click 8.1.7 unix_pyh707e725_0 conda-forge
cloudpickle 2.2.1 pyhd8ed1ab_0 conda-forge
clustalo 1.2.4 hdbdd923_8 bioconda
clustalw 2.1 h4ac6f70_10 bioconda
cmake 3.29.4 h91dbaaa_0 conda-forge
colorama 0.4.6 pyhd8ed1ab_0 conda-forge
conda 4.10.3 py39hf3d152e_4 conda-forge
conda-package-handling 1.7.3 py39h27cfd23_1 pkgs/main
contourpy 1.3.0 py39h74842e3_2 conda-forge
cpp-expected 1.1.0 hf52228f_0 conda-forge
cryptography 42.0.8 py39h8169da8_0 conda-forge
curl 8.8.0 he654da7_1 conda-forge
cycler 0.12.1 pyhd8ed1ab_0 conda-forge
cytoolz 1.0.0 py39h8cd3c5a_1 conda-forge
dask-core 2024.8.0 pyhd8ed1ab_0 conda-forge
dbus 1.13.6 h5008d03_3 conda-forge
deprecated 1.2.15 pypi_0 pypi
dill 0.3.9 pyhd8ed1ab_0 conda-forge
dm-tree 0.1.8 py39h45438f2_0 conda-forge
docutils 0.16 py39hf3d152e_5 conda-forge
efficientnet-pytorch 0.7.1 pyhd8ed1ab_1 conda-forge
eigen 3.2 3 bioconda
ensembl-vep 109.3 pl5321h2a3209d_1 bioconda
entrez-direct 22.4 he881be0_0 bioconda
etils 1.5.1 pyhd8ed1ab_1 conda-forge
exceptiongroup 1.2.2 pyhd8ed1ab_0 conda-forge
expat 2.6.4 h5888daf_0 conda-forge
faiss 1.8.0 py39h1df3c28_1_cpu conda-forge
faiss-cpu 1.8.0 h718b53a_1 conda-forge
fftw 3.3.10 nompi_hf1063bd_110 conda-forge
filelock 3.16.1 pyhd8ed1ab_0 conda-forge
flatbuffers 23.5.26 h59595ed_1 conda-forge
fmt 9.1.0 h924138e_0 conda-forge
font-ttf-dejavu-sans-mono 2.37 hab24e00_0 conda-forge
font-ttf-inconsolata 3.000 h77eed37_0 conda-forge
font-ttf-source-code-pro 2.038 h77eed37_0 conda-forge
font-ttf-ubuntu 0.83 h77eed37_3 conda-forge
fontconfig 2.14.2 h14ed4e7_0 conda-forge
fonts-conda-ecosystem 1 0 conda-forge
fonts-conda-forge 1 0 conda-forge
fonttools 4.55.0 py39h9399b63_0 conda-forge
freetype 2.12.1 h267a509_2 conda-forge
fribidi 1.0.10 h36c2ea0_0 conda-forge
frozenlist 1.5.0 py39h8cd3c5a_0 conda-forge
fsspec 2024.10.0 pyhff2d567_0 conda-forge
gast 0.4.0 pyh9f0ad1d_0 conda-forge
gatk4 4.3.0.0 py36hdfd78af_0 bioconda
gawk 5.3.1 hcd3d067_0 conda-forge
gcc_impl_linux-64 14.2.0 h6b349bd_1 conda-forge
geos 3.13.0 h5888daf_0 conda-forge
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gettext 0.22.5 he02047a_3 conda-forge
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simpleitk 2.4.0 py39hcd839a5_1 conda-forge
sip 6.7.12 py39h3d6467e_0 conda-forge
six 1.16.0 pyhd3eb1b0_0 pkgs/main
sleef 3.7 h1b44611_2 conda-forge
smart-open 7.0.5 pypi_0 pypi
snappy 1.1.10 hdb0a2a9_1 conda-forge
snowflake-connector-python 3.12.2 py39h3b40f6f_1 conda-forge
somacore 1.0.20 pyh4471522_0 tiledb
sortedcontainers 2.4.0 pyhd8ed1ab_0 conda-forge
sparse 0.15.4 pypi_0 pypi
spdlog 1.11.0 h9b3ece8_1 conda-forge
sqlite 3.46.0 h6d4b2fc_0 conda-forge
sra-tools 2.9.6 hf484d3e_0 bioconda
statsmodels 0.14.4 py39hf3d9206_0 conda-forge
stdlib-list 0.11.0 pyhd8ed1ab_0 conda-forge
sympy 1.13.3 pypyh2585a3b_103 conda-forge
sysroot_linux-64 2.17 h4a8ded7_18 conda-forge
t-coffee 12.00.7fb08c2 h26a2512_0 bioconda
tbb 2021.13.0 h84d6215_0 conda-forge
tblib 1.7.0 pypi_0 pypi
tdbudf 0.0.1 pypi_0 pypi
tensorboard 2.13.0 pyhd8ed1ab_0 conda-forge
tensorboard-data-server 0.7.0 py39h7170ec2_2 conda-forge
tensorflow 2.13.1 cpu_py39h4655687_1 conda-forge
tensorflow-base 2.13.1 cpu_py39h65ed569_1 conda-forge
tensorflow-datasets 4.8.3 pyhd8ed1ab_0 conda-forge
tensorflow-estimator 2.13.1 cpu_py39hd56b5fd_1 conda-forge
tensorflow-metadata 1.13.1 pyhd8ed1ab_0 conda-forge
termcolor 2.5.0 pyhd8ed1ab_0 conda-forge
threadloop 1.0.2 pypi_0 pypi
threadpoolctl 3.5.0 pyhc1e730c_0 conda-forge
thrift 0.21.0 pypi_0 pypi
tifffile 2020.6.3 py_0 conda-forge
tiledb 2.26.2 hde83565_0 tiledb/label/for-cloud
tiledb-cloud 0.12.31 pypi_0 pypi
tiledb-ml 0.9.6 pypi_0 pypi
tiledb-py 0.32.2 py39h067de0a_0 conda-forge
tiledbsoma-py 1.15.0rc1 py39ha4d1bf2_0 tiledb/label/rc
tiledbvcf-py 0.36.0 py39he149153_0 tiledb
tk 8.6.13 noxft_h4845f30_101 conda-forge
tktable 2.10 h8bc8fbc_6 conda-forge
toml 0.10.2 pyhd8ed1ab_0 conda-forge
tomli 2.1.0 pyhff2d567_0 conda-forge
tomlkit 0.13.2 pyha770c72_0 conda-forge
toolz 1.0.0 pyhd8ed1ab_0 conda-forge
torchdata 0.6.1 py39h19087ae_0 conda-forge
torchvision 0.15.2 cpu_py39h7f5b5c8_4 conda-forge
tornado 6.4.1 py39h8cd3c5a_1 conda-forge
tqdm 4.61.2 pyhd3eb1b0_1 pkgs/main
typing-extensions 4.12.2 pypi_0 pypi
tzdata 2021a h52ac0ba_0 pkgs/main
ucx 1.14.1 h64cca9d_5 conda-forge
umap-learn 0.5.7 py39hf3d152e_0 conda-forge
unicodedata2 15.1.0 py39h8cd3c5a_1 conda-forge
unzip 6.0 h7f98852_3 conda-forge
urllib3 1.26.6 pyhd3eb1b0_1 pkgs/main
viennarna 2.7.0 py39pl5321hc9faaad_0 bioconda
werkzeug 3.1.3 pyhff2d567_0 conda-forge
wget 1.21.4 hda4d442_0 conda-forge
wheel 0.36.2 pyhd3eb1b0_0 pkgs/main
wrapt 1.16.0 py39h8cd3c5a_1 conda-forge
xarray 2024.3.0 pyhd8ed1ab_0 conda-forge
xcb-util 0.4.0 hd590300_1 conda-forge
xcb-util-image 0.4.0 h8ee46fc_1 conda-forge
xcb-util-keysyms 0.4.0 h8ee46fc_1 conda-forge
xcb-util-renderutil 0.3.9 hd590300_1 conda-forge
xcb-util-wm 0.4.1 h8ee46fc_1 conda-forge
xkeyboard-config 2.42 h4ab18f5_0 conda-forge
xorg-kbproto 1.0.7 hb9d3cd8_1003 conda-forge
xorg-libice 1.1.1 hb9d3cd8_1 conda-forge
xorg-libsm 1.2.4 he73a12e_1 conda-forge
xorg-libx11 1.8.9 h8ee46fc_0 conda-forge
xorg-libxau 1.0.11 hb9d3cd8_1 conda-forge
xorg-libxdmcp 1.1.5 hb9d3cd8_0 conda-forge
xorg-libxext 1.3.4 h0b41bf4_2 conda-forge
xorg-libxrender 0.9.11 hd590300_0 conda-forge
xorg-libxt 1.3.0 hd590300_1 conda-forge
xorg-renderproto 0.11.1 hb9d3cd8_1003 conda-forge
xorg-xextproto 7.3.0 hb9d3cd8_1004 conda-forge
xorg-xf86vidmodeproto 2.3.1 hb9d3cd8_1005 conda-forge
xorg-xproto 7.0.31 hb9d3cd8_1008 conda-forge
xz 5.2.6 h166bdaf_0 conda-forge
yaml 0.2.5 h7b6447c_0 pkgs/main
yaml-cpp 0.7.0 h59595ed_3 conda-forge
yarl 1.17.2 py39h8cd3c5a_0 conda-forge
zipp 3.21.0 pyhd8ed1ab_0 conda-forge
zlib 1.2.13 h4ab18f5_6 conda-forge
zlib-ng 2.0.7 h0b41bf4_0 conda-forge
zstd 1.5.6 ha6fb4c9_0 conda-forge
Dependencies
Package Version Build Channel
_libgcc_mutex 0.1 conda_forge conda-forge
_openmp_mutex 4.5 2_kmp_llvm conda-forge
absl-py 1.4.0 pyhd8ed1ab_0 conda-forge
affine 2.4.0 pypi_0 pypi
aiobotocore 2.15.2 pyhd8ed1ab_0 conda-forge
aiohappyeyeballs 2.4.3 pyhd8ed1ab_0 conda-forge
aiohttp 3.11.6 py39h9399b63_0 conda-forge
aioitertools 0.12.0 pyhd8ed1ab_0 conda-forge
aiosignal 1.3.1 pyhd8ed1ab_0 conda-forge
alsa-lib 1.2.13 hb9d3cd8_0 conda-forge
anndata 0.10.9 pyhd8ed1ab_0 conda-forge
array-api-compat 1.9.1 pyhd8ed1ab_0 conda-forge
asn1crypto 1.5.1 pyhd8ed1ab_0 conda-forge
astunparse 1.6.3 pyhd8ed1ab_2 conda-forge
async-timeout 5.0.1 pyhd8ed1ab_0 conda-forge
attr 2.5.1 h166bdaf_1 conda-forge
attrs 24.2.0 pyh71513ae_0 conda-forge
aws-c-auth 0.7.3 h28f7589_1 conda-forge
aws-c-cal 0.6.1 hc309b26_1 conda-forge
aws-c-common 0.9.0 hd590300_0 conda-forge
aws-c-compression 0.2.17 h4d4d85c_2 conda-forge
aws-c-event-stream 0.3.1 h2e3709c_4 conda-forge
aws-c-http 0.7.11 h00aa349_4 conda-forge
aws-c-io 0.13.32 he9a53bd_1 conda-forge
aws-c-mqtt 0.9.3 hb447be9_1 conda-forge
aws-c-s3 0.3.14 hf3aad02_1 conda-forge
aws-c-sdkutils 0.1.12 h4d4d85c_1 conda-forge
aws-checksums 0.1.17 h4d4d85c_1 conda-forge
aws-crt-cpp 0.21.0 hb942446_5 conda-forge
aws-sdk-cpp 1.10.57 h85b1a90_19 conda-forge
awscli 1.35.2 py39hf3d152e_0 conda-forge
bcftools 1.20 h8b25389_1 bioconda
bedtools 2.31.1 hf5e1c6e_2 bioconda
binutils 2.43 h4852527_2 conda-forge
binutils_impl_linux-64 2.43 h4bf12b8_1 conda-forge
binutils_linux-64 2.43 h4852527_1 conda-forge
blas 2.125 openblas conda-forge
blas-devel 3.9.0 25_linux64_openblas conda-forge
blinker 1.9.0 pyhff2d567_0 conda-forge
blosc 1.21.5 h0f2a231_0 conda-forge
boto3 1.35.36 pyhd8ed1ab_0 conda-forge
botocore 1.35.36 pyge38_1234567_0 conda-forge
branca 0.8.0 pypi_0 pypi
brotli 1.0.9 h166bdaf_9 conda-forge
brotli-bin 1.0.9 h166bdaf_9 conda-forge
brotlipy 0.7.0 py39h27cfd23_1003 pkgs/main
bzip2 1.0.8 h4bc722e_7 conda-forge
c-ares 1.33.1 heb4867d_0 conda-forge
c-blosc2 2.15.1 hc57e6cf_0 conda-forge
c-compiler 1.8.0 h2b85faf_1 conda-forge
ca-certificates 2024.8.30 hbcca054_0 conda-forge
cached-property 1.5.2 hd8ed1ab_1 conda-forge
cached_property 1.5.2 pyha770c72_1 conda-forge
cachetools 5.5.0 pyhd8ed1ab_0 conda-forge
cairo 1.18.0 h3faef2a_0 conda-forge
cellxgene-census 1.15.0 pyh4471522_2 tiledb
certifi 2024.8.30 pyhd8ed1ab_0 conda-forge
cf_xarray 0.9.5 pyhd8ed1ab_0 conda-forge
cffi 1.17.1 py39h15c3d72_0 conda-forge
cftime 1.6.4.post1 pypi_0 pypi
chardet 4.0.0 py39h06a4308_1003 pkgs/main
charset-normalizer 3.4.0 pyhd8ed1ab_0 conda-forge
clarabel 0.7.1 py39ha56439a_0 conda-forge
click 8.1.7 unix_pyh707e725_0 conda-forge
click-plugins 1.1.1 pypi_0 pypi
cligj 0.7.2 pypi_0 pypi
cloudpickle 2.2.1 pyhd8ed1ab_0 conda-forge
cmake 3.30.3 hf9cb763_0 conda-forge
colorama 0.4.6 pyhd8ed1ab_0 conda-forge
conda 4.10.3 py39hf3d152e_4 conda-forge
conda-package-handling 1.7.3 py39h27cfd23_1 pkgs/main
contourpy 1.3.0 py39h74842e3_2 conda-forge
cpp-expected 1.1.0 hf52228f_0 conda-forge
cpython 3.9.20 py39hd8ed1ab_1 conda-forge
cryptography 42.0.8 py39h8169da8_0 conda-forge
cvxpy 1.5.3 py39hf3d152e_0 conda-forge
cvxpy-base 1.5.3 py39h5114956_0 conda-forge
cxx-compiler 1.8.0 h1a2810e_1 conda-forge
cycler 0.12.1 pyhd8ed1ab_0 conda-forge
cython 0.29.32 pypi_0 pypi
cytoolz 1.0.0 py39h8cd3c5a_1 conda-forge
dask-core 2024.8.0 pyhd8ed1ab_0 conda-forge
dbus 1.13.6 h5008d03_3 conda-forge
deprecated 1.2.15 pypi_0 pypi
dill 0.3.9 pyhd8ed1ab_0 conda-forge
dm-tree 0.1.8 py39h45438f2_0 conda-forge
docutils 0.16 py39hf3d152e_5 conda-forge
ecos 2.0.14 py39hf3d9206_1 conda-forge
efficientnet-pytorch 0.7.1 pyhd8ed1ab_1 conda-forge
eigen 3.2 3 bioconda
esmf 8.6.1 nompi_h4441c20_3 conda-forge
esmpy 8.6.1 pyhc1e730c_0 conda-forge
etils 1.5.1 pyhd8ed1ab_1 conda-forge
exceptiongroup 1.2.2 pyhd8ed1ab_0 conda-forge
expat 2.6.4 h5888daf_0 conda-forge
faiss 1.8.0 py39h1df3c28_1_cpu conda-forge
faiss-cpu 1.8.0 h718b53a_1 conda-forge
fftw 3.3.10 nompi_hf1063bd_110 conda-forge
filelock 3.16.1 pyhd8ed1ab_0 conda-forge
fiona 1.10.1 pypi_0 pypi
flatbuffers 23.5.26 h59595ed_1 conda-forge
fmt 9.1.0 h924138e_0 conda-forge
folium 0.18.0 pypi_0 pypi
font-ttf-dejavu-sans-mono 2.37 hab24e00_0 conda-forge
font-ttf-inconsolata 3.000 h77eed37_0 conda-forge
font-ttf-source-code-pro 2.038 h77eed37_0 conda-forge
font-ttf-ubuntu 0.83 h77eed37_3 conda-forge
fontconfig 2.15.0 h7e30c49_1 conda-forge
fonts-conda-ecosystem 1 0 conda-forge
fonts-conda-forge 1 0 conda-forge
fonttools 4.55.0 py39h9399b63_0 conda-forge
freetype 2.12.1 h267a509_2 conda-forge
frozenlist 1.5.0 py39h8cd3c5a_0 conda-forge
fsspec 2024.10.0 pyhff2d567_0 conda-forge
gast 0.4.0 pyh9f0ad1d_0 conda-forge
gcc 13.3.0 h9576a4e_1 conda-forge
gcc_impl_linux-64 13.3.0 hfea6d02_1 conda-forge
gcc_linux-64 13.3.0 hc28eda2_7 conda-forge
geojson 3.1.0 pypi_0 pypi
geopandas 1.0.1 pypi_0 pypi
geos 3.13.0 h5888daf_0 conda-forge
geotiff 1.7.3 h77b800c_3 conda-forge
get-annotations 0.1.2 pyhd8ed1ab_0 conda-forge
gettext 0.22.5 he02047a_3 conda-forge
gettext-tools 0.22.5 he02047a_3 conda-forge
gflags 2.2.2 h5888daf_1005 conda-forge
giflib 5.2.2 hd590300_0 conda-forge
git-lfs 3.6.0 h647637d_0 conda-forge
glib 2.82.2 h44428e9_0 conda-forge
glib-tools 2.82.2 h4833e2c_0 conda-forge
glog 0.6.0 h6f12383_0 conda-forge
gmp 6.3.0 hac33072_2 conda-forge
gmpy2 2.1.5 py39h7196dd7_2 conda-forge
google-auth 2.36.0 pyhff2d567_0 conda-forge
google-auth-oauthlib 1.0.0 pyhd8ed1ab_1 conda-forge
google-pasta 0.2.0 pyhd8ed1ab_1 conda-forge
googleapis-common-protos 1.66.0 pyhff2d567_0 conda-forge
graphite2 1.3.13 h59595ed_1003 conda-forge
grpcio 1.54.3 py39h227be39_0 conda-forge
gsl 2.7 he838d99_0 conda-forge
gst-plugins-base 1.22.9 hfa15dee_1 conda-forge
gstreamer 1.22.9 h98fc4e7_1 conda-forge
gxx 13.3.0 h9576a4e_1 conda-forge
gxx_impl_linux-64 13.3.0 hdbfa832_1 conda-forge
gxx_linux-64 13.3.0 h6834431_7 conda-forge
h5py 3.12.1 nompi_py39h30a5a8d_102 conda-forge
harfbuzz 8.5.0 hfac3d4d_0 conda-forge
hdf4 4.2.15 h2a13503_7 conda-forge
hdf5 1.14.3 nompi_hdf9ad27_105 conda-forge
hnswlib 0.7.0 py39hf59e57a_5 conda-forge
htslib 1.20 h18253b1_2 tiledb
icu 73.2 h59595ed_0 conda-forge
idna 2.10 pyhd3eb1b0_0 pkgs/main
imagecodecs-lite 2019.12.3 py39hd92a3bb_8 conda-forge
imageio 2.36.0 pyh12aca89_1 conda-forge
importlib-metadata 8.5.0 pyha770c72_0 conda-forge
importlib-resources 6.4.5 pyhd8ed1ab_0 conda-forge
importlib_metadata 8.5.0 hd8ed1ab_0 conda-forge
importlib_resources 6.4.5 pyhd8ed1ab_0 conda-forge
jaeger-client 4.8.0 pypi_0 pypi
jax 0.4.27 pyhd8ed1ab_0 conda-forge
jaxlib 0.4.23 py39h6a678d5_1 pkgs/main
jinja2 3.1.4 pyhd8ed1ab_0 conda-forge
jmespath 1.0.1 pyhd8ed1ab_0 conda-forge
joblib 1.4.2 pyhd8ed1ab_0 conda-forge
jsonschema 4.23.0 pypi_0 pypi
jsonschema-specifications 2024.10.1 pypi_0 pypi
keras 2.13.1 pyhd8ed1ab_0 conda-forge
keras-applications 1.0.8 py_1 conda-forge
keras-preprocessing 1.1.2 pyhd8ed1ab_0 conda-forge
kernel-headers_linux-64 3.10.0 he073ed8_18 conda-forge
keyutils 1.6.1 h166bdaf_0 conda-forge
kiwisolver 1.4.7 py39h74842e3_0 conda-forge
krb5 1.21.3 h659f571_0 conda-forge
lame 3.100 h166bdaf_1003 conda-forge
laspy 2.5.4 py39h8003fee_1 conda-forge
laszip 3.4.3 h9c3ff4c_2 conda-forge
lazrs-python 0.6.2 py39he612d8f_0 conda-forge
lcms2 2.16 hb7c19ff_0 conda-forge
ld_impl_linux-64 2.43 h712a8e2_1 conda-forge
legacy-api-wrap 1.4 pyhd8ed1ab_1 conda-forge
lerc 4.0.0 h27087fc_0 conda-forge
libabseil 20230125.3 cxx17_h59595ed_0 conda-forge
libaec 1.1.3 h59595ed_0 conda-forge
libarchive 3.6.2 h039dbb9_1 conda-forge
libarrow 12.0.1 hb87d912_8_cpu conda-forge
libasprintf 0.22.5 he8f35ee_3 conda-forge
libasprintf-devel 0.22.5 he8f35ee_3 conda-forge
libblas 3.9.0 25_linux64_openblas conda-forge
libbrotlicommon 1.0.9 h166bdaf_9 conda-forge
libbrotlidec 1.0.9 h166bdaf_9 conda-forge
libbrotlienc 1.0.9 h166bdaf_9 conda-forge
libcap 2.69 h0f662aa_0 conda-forge
libcblas 3.9.0 25_linux64_openblas conda-forge
libclang 15.0.7 default_h127d8a8_5 conda-forge
libclang13 15.0.7 default_h5d6823c_5 conda-forge
libcom_err-cos6-x86_64 1.41.12 4 pkgs/main
libcrc32c 1.1.2 h9c3ff4c_0 conda-forge
libcups 2.3.3 h4637d8d_4 conda-forge
libcurl 8.10.1 hbbe4b11_0 conda-forge
libdeflate 1.19 hd590300_0 conda-forge
libedit 3.1.20191231 he28a2e2_2 conda-forge
libev 4.33 hd590300_2 conda-forge
libevent 2.1.12 hf998b51_1 conda-forge
libexpat 2.6.4 h5888daf_0 conda-forge
libfaiss 1.8.0 h0ce047f_1_cpu conda-forge
libffi 3.4.2 h7f98852_5 conda-forge
libflac 1.4.3 h59595ed_0 conda-forge
libgcc 14.2.0 h77fa898_1 conda-forge
libgcc-devel_linux-64 13.3.0 h84ea5a7_101 conda-forge
libgcc-ng 14.2.0 h69a702a_1 conda-forge
libgcrypt 1.11.0 h4ab18f5_1 conda-forge
libgettextpo 0.22.5 he02047a_3 conda-forge
libgettextpo-devel 0.22.5 he02047a_3 conda-forge
libgfortran 14.2.0 h69a702a_1 conda-forge
libgfortran-ng 14.2.0 h69a702a_1 conda-forge
libgfortran5 14.2.0 hd5240d6_1 conda-forge
libglib 2.82.2 h2ff4ddf_0 conda-forge
libgomp 14.2.0 h77fa898_1 conda-forge
libgoogle-cloud 2.12.0 hac9eb74_1 conda-forge
libgpg-error 1.51 hbd13f7d_1 conda-forge
libgrpc 1.54.3 hb20ce57_0 conda-forge
libhwloc 2.11.1 default_hecaa2ac_1000 conda-forge
libiconv 1.17 hd590300_2 conda-forge
libitk 5.4.0 h5de25d7_3 conda-forge
libjpeg-turbo 3.0.0 hd590300_1 conda-forge
liblapack 3.9.0 25_linux64_openblas conda-forge
liblapacke 3.9.0 25_linux64_openblas conda-forge
libllvm14 14.0.6 hcd5def8_4 conda-forge
libllvm15 15.0.7 hb3ce162_4 conda-forge
libmamba 1.1.0 hde2b089_3 conda-forge
libmambapy 1.1.0 py39hf0aba66_3 conda-forge
libnetcdf 4.9.2 nompi_h135f659_114 conda-forge
libnghttp2 1.58.0 h47da74e_1 conda-forge
libnsl 2.0.1 hd590300_0 conda-forge
libnuma 2.0.18 h4ab18f5_2 conda-forge
libogg 1.3.5 h4ab18f5_0 conda-forge
libopenblas 0.3.28 pthreads_h94d23a6_1 conda-forge
libopus 1.3.1 h7f98852_1 conda-forge
libosqp 0.6.3 h5888daf_1 conda-forge
libpng 1.6.44 hadc24fc_0 conda-forge
libpq 16.6 h2d7952a_0 conda-forge
libprotobuf 3.21.12 hfc55251_2 conda-forge
libqdldl 0.1.7 hcb278e6_0 conda-forge
libsanitizer 13.3.0 heb74ff8_1 conda-forge
libsndfile 1.2.2 hc60ed4a_1 conda-forge
libsolv 0.7.30 h3509ff9_0 conda-forge
libsqlite 3.46.1 hadc24fc_0 conda-forge
libssh2 1.11.0 h0841786_0 conda-forge
libstdcxx 14.2.0 hc0a3c3a_1 conda-forge
libstdcxx-devel_linux-64 13.3.0 h84ea5a7_101 conda-forge
libstdcxx-ng 14.2.0 h4852527_1 conda-forge
libsystemd0 256.7 h2774228_1 conda-forge
libthrift 0.18.1 h8fd135c_2 conda-forge
libtiff 4.6.0 ha9c0a0a_2 conda-forge
libtiledbsoma 1.15.0rc1 hd1a9fd6_0 tiledb/label/rc
libtiledbvcf 0.35.0 h53fe7cb_0 tiledb
libutf8proc 2.8.0 h166bdaf_0 conda-forge
libuuid 2.38.1 h0b41bf4_0 conda-forge
libuv 1.49.2 hb9d3cd8_0 conda-forge
libvorbis 1.3.7 h9c3ff4c_0 conda-forge
libwebp-base 1.4.0 hd590300_0 conda-forge
libxcb 1.15 h0b41bf4_0 conda-forge
libxcrypt 4.4.36 hd590300_1 conda-forge
libxkbcommon 1.7.0 h662e7e4_0 conda-forge
libxml2 2.12.7 h4c95cb1_3 conda-forge
libzip 1.11.2 h6991a6a_0 conda-forge
libzlib 1.3.1 h4ab18f5_1 conda-forge
llvm-openmp 19.1.4 h024ca30_0 conda-forge
llvmlite 0.43.0 py39hf8b6b1a_1 conda-forge
locket 1.0.0 pyhd8ed1ab_0 conda-forge
lz4-c 1.9.4 hcb278e6_0 conda-forge
lzo 2.10 hd590300_1001 conda-forge
make 4.4.1 hb9d3cd8_2 conda-forge
mamba 1.1.0 py39hc5d2bb1_3 conda-forge
markdown 3.6 pyhd8ed1ab_0 conda-forge
markupsafe 3.0.2 py39h9399b63_0 conda-forge
matplotlib 3.9.1 py39hf3d152e_1 conda-forge
matplotlib-base 3.9.1 py39h0565ad7_2 conda-forge
mercantile 1.2.1 pypi_0 pypi
mkl 2022.2.1 h6508926_16999 conda-forge
ml_dtypes 0.5.0 py39h3b40f6f_0 conda-forge
mpc 1.3.1 h24ddda3_1 conda-forge
mpfr 4.2.1 h90cbb55_3 conda-forge
mpg123 1.32.9 hc50e24c_0 conda-forge
mpmath 1.3.0 pyhd8ed1ab_0 conda-forge
multidict 6.1.0 py39h9399b63_1 conda-forge
munkres 1.0.7 py_1 bioconda
mysql-common 8.0.33 hf1915f5_6 conda-forge
mysql-libs 8.0.33 hca2cd23_6 conda-forge
natsort 8.4.0 pyhd8ed1ab_0 conda-forge
ncurses 6.5 he02047a_1 conda-forge
netcdf-fortran 4.6.1 nompi_h22f9119_106 conda-forge
netcdf4 1.6.0 pypi_0 pypi
networkx 3.2.1 pyhd8ed1ab_0 conda-forge
nlohmann_json 3.11.3 he02047a_1 conda-forge
nomkl 3.0 0 pkgs/main
nspr 4.36 h5888daf_0 conda-forge
nss 3.105 hd34e28f_0 conda-forge
numba 0.60.0 py39h0320e7d_0 conda-forge
numexpr 2.10.1 py39h0a7e20a_103 conda-forge
numpy 1.25.0 py39h6183b62_0 conda-forge
oauthlib 3.2.2 pyhd8ed1ab_0 conda-forge
openblas 0.3.28 pthreads_h6ec200e_1 conda-forge
openjpeg 2.5.2 h488ebb8_0 conda-forge
openssl 3.4.0 hb9d3cd8_0 conda-forge
opentelemetry-api 1.28.2 pypi_0 pypi
opentelemetry-sdk 1.28.2 pypi_0 pypi
opentelemetry-semantic-conventions 0.49b2 pypi_0 pypi
opentracing 2.4.0 pypi_0 pypi
opt-einsum 3.4.0 hd8ed1ab_0 conda-forge
opt_einsum 3.4.0 pyhd8ed1ab_0 conda-forge
orc 1.9.0 h2f23424_1 conda-forge
osqp 0.6.7.post3 py39h3b40f6f_1 conda-forge
packaging 24.2 pyhff2d567_1 conda-forge
pandas 1.5.3 py39h2ad29b5_1 conda-forge
partd 1.4.2 pyhd8ed1ab_0 conda-forge
patsy 1.0.1 pyhff2d567_0 conda-forge
pcre2 10.44 hba22ea6_2 conda-forge
pdal 3.4.5 pypi_0 pypi
perl 5.32.1 7_hd590300_perl5 conda-forge
pillow 10.3.0 py39h90c7501_0 conda-forge
pip 21.1.3 py39h06a4308_0 pkgs/main
pixman 0.43.2 h59595ed_0 conda-forge
platformdirs 4.3.6 pyhd8ed1ab_0 conda-forge
ply 3.11 pyhd8ed1ab_2 conda-forge
portalocker 3.0.0 py39hf3d152e_0 conda-forge
powerlaw 1.5 pypi_0 pypi
proj 9.5.0 h12925eb_0 conda-forge
proj-data 1.19 h707e725_0 conda-forge
promise 2.3 py39hf3d152e_9 conda-forge
propcache 0.2.0 py39h8cd3c5a_2 conda-forge
protobuf 4.21.12 py39h227be39_0 conda-forge
psutil 6.1.0 py39h8cd3c5a_0 conda-forge
pthread-stubs 0.4 hb9d3cd8_1002 conda-forge
pulseaudio-client 16.1 hb77b528_5 conda-forge
py-cpuinfo 9.0.0 pyhd8ed1ab_0 conda-forge
pyarrow 12.0.1 py39hfbd5978_8_cpu conda-forge
pyarrow-hotfix 0.6 pyhd8ed1ab_0 conda-forge
pyasn1 0.6.1 pyhd8ed1ab_1 conda-forge
pyasn1-modules 0.4.1 pyhd8ed1ab_0 conda-forge
pybedtools 0.10.0 py39hdf45acc_2 bioconda
pybind11-abi 4 hd8ed1ab_3 conda-forge
pycosat 0.6.3 py39h27cfd23_0 pkgs/main
pycparser 2.20 py_2 pkgs/main
pyjwt 2.10.0 pyhff2d567_0 conda-forge
pynndescent 0.5.13 pyhff2d567_0 conda-forge
pyogrio 0.10.0 pypi_0 pypi
pyopenssl 20.0.1 pypi_0 pypi
pyparsing 3.2.0 pyhd8ed1ab_1 conda-forge
pypdf 5.1.0 pyha770c72_0 conda-forge
pyproj 3.6.1 pypi_0 pypi
pyqt 5.15.9 py39h52134e7_5 conda-forge
pyqt5-sip 12.12.2 py39h3d6467e_5 conda-forge
pysam 0.22.0 py39h68d8fd3_1 tiledb
pysocks 1.7.1 py39h06a4308_0 pkgs/main
pystac 1.10.1 pyhd8ed1ab_0 conda-forge
pystac-client 0.7.3 pypi_0 pypi
pytables 3.9.2 py39hd89fbf8_3 conda-forge
python 3.9.20 h13acc7a_1_cpython conda-forge
python-dateutil 2.9.0.post0 pyhff2d567_0 conda-forge
python-flatbuffers 24.3.25 pyh59ac667_0 conda-forge
python_abi 3.9 5_cp39 conda-forge
pytorch 2.0.0 cpu_mkl_py39h9f63279_101 conda-forge
pytz 2024.2 pyhd8ed1ab_0 conda-forge
pyu2f 0.1.5 pyhd8ed1ab_0 conda-forge
pywavelets 1.6.0 py39hd92a3bb_0 conda-forge
pyyaml 6.0.2 py39h8cd3c5a_1 conda-forge
qdldl-python 0.1.7.post4 py39h3b40f6f_1 conda-forge
qhull 2020.2 h434a139_5 conda-forge
qt-main 5.15.8 h5810be5_19 conda-forge
rasterio 1.4a1 pypi_0 pypi
rdma-core 28.9 h59595ed_1 conda-forge
re2 2023.03.02 h8c504da_0 conda-forge
readline 8.2 h8228510_1 conda-forge
referencing 0.35.1 pypi_0 pypi
reproc 14.2.4.post0 hd590300_1 conda-forge
reproc-cpp 14.2.4.post0 h59595ed_1 conda-forge
requests 2.25.1 pypi_0 pypi
requests-oauthlib 2.0.0 pyhd8ed1ab_0 conda-forge
rhash 1.4.5 hb9d3cd8_0 conda-forge
rioxarray 0.14.1 pypi_0 pypi
rpds-py 0.21.0 pypi_0 pypi
rsa 4.7.2 pyh44b312d_0 conda-forge
rtree 1.3.0 pypi_0 pypi
ruamel_yaml 0.15.100 py39h27cfd23_0 pkgs/main
s2n 1.3.49 h06160fa_0 conda-forge
s3fs 2024.10.0 pyhd8ed1ab_0 conda-forge
s3transfer 0.10.4 pyhd8ed1ab_0 conda-forge
scanpy 1.10.3 pyhd8ed1ab_0 conda-forge
scikit-image 0.19.3 py39h4661b88_2 conda-forge
scikit-learn 1.5.2 py39h4b7350c_1 conda-forge
scikit-mobility 1.1.2 pypi_0 pypi
scipy 1.13.1 py39haf93ffa_0 conda-forge
scs 3.2.7 default_py39h8e67e81_1 conda-forge
seaborn 0.13.2 hd8ed1ab_2 conda-forge
seaborn-base 0.13.2 pyhd8ed1ab_2 conda-forge
segyio 1.9.12 pypi_0 pypi
session-info 1.0.0 pyhd8ed1ab_0 conda-forge
setuptools 52.0.0 py39h06a4308_0 pkgs/main
shapely 2.0.6 py39hca88cd1_2 conda-forge
simdjson 3.10.1 h84d6215_0 conda-forge
simpleitk 2.4.0 py39hcd839a5_1 conda-forge
sip 6.7.12 py39h3d6467e_0 conda-forge
six 1.16.0 pyhd3eb1b0_0 pkgs/main
sleef 3.7 h1b44611_2 conda-forge
smart-open 7.0.5 pypi_0 pypi
snappy 1.1.10 hdb0a2a9_1 conda-forge
snowflake-connector-python 3.12.2 py39h3b40f6f_1 conda-forge
somacore 1.0.20 pyh4471522_0 tiledb
sortedcontainers 2.4.0 pyhd8ed1ab_0 conda-forge
sparse 0.15.4 pyh267e887_1 conda-forge
spdlog 1.11.0 h9b3ece8_1 conda-forge
sqlite 3.46.1 h9eae976_0 conda-forge
statsmodels 0.14.4 py39hf3d9206_0 conda-forge
stdlib-list 0.11.0 pyhd8ed1ab_0 conda-forge
sympy 1.13.3 pyh2585a3b_104 conda-forge
sysroot_linux-64 2.17 h4a8ded7_18 conda-forge
tbb 2021.13.0 h84d6215_0 conda-forge
tblib 1.7.0 pypi_0 pypi
tdbudf 0.0.1 pypi_0 pypi
tensorboard 2.13.0 pyhd8ed1ab_0 conda-forge
tensorboard-data-server 0.7.0 py39h7170ec2_2 conda-forge
tensorflow 2.13.1 cpu_py39h4655687_1 conda-forge
tensorflow-base 2.13.1 cpu_py39h65ed569_1 conda-forge
tensorflow-datasets 4.8.3 pyhd8ed1ab_0 conda-forge
tensorflow-estimator 2.13.1 cpu_py39hd56b5fd_1 conda-forge
tensorflow-metadata 1.13.1 pyhd8ed1ab_0 conda-forge
termcolor 2.5.0 pyhd8ed1ab_0 conda-forge
threadloop 1.0.2 pypi_0 pypi
threadpoolctl 3.5.0 pyhc1e730c_0 conda-forge
thrift 0.21.0 pypi_0 pypi
tifffile 2020.6.3 py_0 conda-forge
tiledb 2.26.2 hde83565_0 tiledb/label/for-cloud
tiledb-cf 0.9.1 pypi_0 pypi
tiledb-cloud 0.12.31 pypi_0 pypi
tiledb-ml 0.9.6 pypi_0 pypi
tiledb-py 0.32.2 py39h067de0a_0 conda-forge
tiledb-segy 0.3.0 pypi_0 pypi
tiledbsoma-py 1.15.0rc1 py39ha4d1bf2_0 tiledb/label/rc
tiledbvcf-py 0.35.0 py39hb8eef30_0 tiledb
tk 8.6.13 noxft_h4845f30_101 conda-forge
toml 0.10.2 pyhd8ed1ab_0 conda-forge
tomli 2.1.0 pyhff2d567_0 conda-forge
tomlkit 0.13.2 pyha770c72_0 conda-forge
toolz 1.0.0 pyhd8ed1ab_0 conda-forge
torchdata 0.6.1 py39h19087ae_0 conda-forge
torchvision 0.15.2 cpu_py39h7f5b5c8_4 conda-forge
tornado 6.4.1 py39h8cd3c5a_1 conda-forge
tqdm 4.61.2 pyhd3eb1b0_1 pkgs/main
typing-extensions 4.12.2 pypi_0 pypi
tzdata 2021a h52ac0ba_0 pkgs/main
ucx 1.14.1 h64cca9d_5 conda-forge
umap-learn 0.5.7 py39hf3d152e_0 conda-forge
unicodedata2 15.1.0 py39h8cd3c5a_1 conda-forge
unzip 6.0 h7f98852_3 conda-forge
urllib3 1.26.6 pyhd3eb1b0_1 pkgs/main
urlpath 1.2.0 pypi_0 pypi
werkzeug 3.1.3 pyhff2d567_0 conda-forge
wheel 0.36.2 pyhd3eb1b0_0 pkgs/main
wrapt 1.16.0 py39h8cd3c5a_1 conda-forge
xarray 2024.3.0 pyhd8ed1ab_0 conda-forge
xcb-util 0.4.0 hd590300_1 conda-forge
xcb-util-image 0.4.0 h8ee46fc_1 conda-forge
xcb-util-keysyms 0.4.0 h8ee46fc_1 conda-forge
xcb-util-renderutil 0.3.9 hd590300_1 conda-forge
xcb-util-wm 0.4.1 h8ee46fc_1 conda-forge
xesmf 0.8.8 pyhd8ed1ab_0 conda-forge
xkeyboard-config 2.42 h4ab18f5_0 conda-forge
xorg-kbproto 1.0.7 hb9d3cd8_1003 conda-forge
xorg-libice 1.1.1 hb9d3cd8_1 conda-forge
xorg-libsm 1.2.4 he73a12e_1 conda-forge
xorg-libx11 1.8.9 h8ee46fc_0 conda-forge
xorg-libxau 1.0.11 hb9d3cd8_1 conda-forge
xorg-libxdmcp 1.1.5 hb9d3cd8_0 conda-forge
xorg-libxext 1.3.4 h0b41bf4_2 conda-forge
xorg-libxrender 0.9.11 hd590300_0 conda-forge
xorg-renderproto 0.11.1 hb9d3cd8_1003 conda-forge
xorg-xextproto 7.3.0 hb9d3cd8_1004 conda-forge
xorg-xf86vidmodeproto 2.3.1 hb9d3cd8_1005 conda-forge
xorg-xproto 7.0.31 hb9d3cd8_1008 conda-forge
xyzservices 2024.9.0 pypi_0 pypi
xz 5.2.6 h166bdaf_0 conda-forge
yaml 0.2.5 h7b6447c_0 pkgs/main
yaml-cpp 0.7.0 h59595ed_3 conda-forge
yarl 1.17.2 py39h8cd3c5a_0 conda-forge
zipp 3.21.0 pyhd8ed1ab_0 conda-forge
zlib 1.3.1 h4ab18f5_1 conda-forge
zlib-ng 2.2.2 h5888daf_0 conda-forge
zstd 1.5.6 ha6fb4c9_0 conda-forge
Dependencies
Package Version Build Channel
_libgcc_mutex 0.1 conda_forge conda-forge
_openmp_mutex 4.5 2_kmp_llvm conda-forge
absl-py 1.4.0 pyhd8ed1ab_0 conda-forge
aiobotocore 2.15.2 pyhd8ed1ab_0 conda-forge
aiohappyeyeballs 2.4.3 pyhd8ed1ab_0 conda-forge
aiohttp 3.11.6 py39h9399b63_0 conda-forge
aioitertools 0.12.0 pyhd8ed1ab_0 conda-forge
aiosignal 1.3.1 pyhd8ed1ab_0 conda-forge
alsa-lib 1.2.13 hb9d3cd8_0 conda-forge
anndata 0.10.9 pyhd8ed1ab_0 conda-forge
annotated-types 0.7.0 pypi_0 pypi
anyio 4.6.2.post1 pyhd8ed1ab_0 conda-forge
argon2-cffi 23.1.0 pyhd8ed1ab_0 conda-forge
argon2-cffi-bindings 21.2.0 py39h8cd3c5a_5 conda-forge
array-api-compat 1.9.1 pyhd8ed1ab_0 conda-forge
arrow 1.3.0 pyhd8ed1ab_0 conda-forge
asciitree 0.3.3 pypi_0 pypi
asn1crypto 1.5.1 pyhd8ed1ab_0 conda-forge
asttokens 2.4.1 pyhd8ed1ab_0 conda-forge
astunparse 1.6.3 pyhd8ed1ab_2 conda-forge
async-lru 2.0.4 pyhd8ed1ab_0 conda-forge
async-timeout 5.0.1 pyhd8ed1ab_0 conda-forge
attr 2.5.1 h166bdaf_1 conda-forge
attrs 24.2.0 pyh71513ae_0 conda-forge
aws-c-auth 0.7.3 h28f7589_1 conda-forge
aws-c-cal 0.6.1 hc309b26_1 conda-forge
aws-c-common 0.9.0 hd590300_0 conda-forge
aws-c-compression 0.2.17 h4d4d85c_2 conda-forge
aws-c-event-stream 0.3.1 h2e3709c_4 conda-forge
aws-c-http 0.7.11 h00aa349_4 conda-forge
aws-c-io 0.13.32 he9a53bd_1 conda-forge
aws-c-mqtt 0.9.3 hb447be9_1 conda-forge
aws-c-s3 0.3.14 hf3aad02_1 conda-forge
aws-c-sdkutils 0.1.12 h4d4d85c_1 conda-forge
aws-checksums 0.1.17 h4d4d85c_1 conda-forge
aws-crt-cpp 0.21.0 hb942446_5 conda-forge
aws-sdk-cpp 1.10.57 h85b1a90_19 conda-forge
awscli 1.35.2 py39hf3d152e_0 conda-forge
babel 2.16.0 pyhd8ed1ab_0 conda-forge
bcftools 1.20 h8b25389_1 bioconda
beautifulsoup4 4.12.3 pyha770c72_0 conda-forge
bedtools 2.31.1 hf5e1c6e_2 bioconda
blas 2.125 openblas conda-forge
blas-devel 3.9.0 25_linux64_openblas conda-forge
bleach 6.2.0 pyhd8ed1ab_0 conda-forge
blinker 1.9.0 pyhff2d567_0 conda-forge
blosc 1.21.5 h0f2a231_0 conda-forge
boto3 1.35.36 pyhd8ed1ab_0 conda-forge
botocore 1.35.36 pyge38_1234567_0 conda-forge
brotli 1.0.9 h166bdaf_9 conda-forge
brotli-bin 1.0.9 h166bdaf_9 conda-forge
brotlipy 0.7.0 py39h27cfd23_1003 pkgs/main
bzip2 1.0.8 h4bc722e_7 conda-forge
c-ares 1.33.1 heb4867d_0 conda-forge
c-blosc2 2.15.1 hc57e6cf_0 conda-forge
ca-certificates 2024.8.30 hbcca054_0 conda-forge
cached-property 1.5.2 hd8ed1ab_1 conda-forge
cached_property 1.5.2 pyha770c72_1 conda-forge
cachetools 5.5.0 pyhd8ed1ab_0 conda-forge
cairo 1.18.0 h3faef2a_0 conda-forge
cellxgene-census 1.15.0 pyh4471522_2 tiledb
certifi 2024.8.30 pyhd8ed1ab_0 conda-forge
cffi 1.17.1 py39h15c3d72_0 conda-forge
chardet 4.0.0 py39h06a4308_1003 pkgs/main
charset-normalizer 3.4.0 pyhd8ed1ab_0 conda-forge
click 8.1.7 unix_pyh707e725_0 conda-forge
cloudpickle 2.2.1 pyhd8ed1ab_0 conda-forge
cmake 3.30.3 hf9cb763_0 conda-forge
colorama 0.4.6 pyhd8ed1ab_0 conda-forge
comm 0.2.2 pyhd8ed1ab_0 conda-forge
conda 4.10.3 py39hf3d152e_4 conda-forge
conda-package-handling 1.7.3 py39h27cfd23_1 pkgs/main
contourpy 1.3.0 py39h74842e3_2 conda-forge
cpp-expected 1.1.0 hf52228f_0 conda-forge
cryptography 42.0.8 py39h8169da8_0 conda-forge
cycler 0.12.1 pyhd8ed1ab_0 conda-forge
cytoolz 1.0.0 py39h8cd3c5a_1 conda-forge
dask-core 2024.8.0 pyhd8ed1ab_0 conda-forge
dbus 1.13.6 h5008d03_3 conda-forge
debugpy 1.8.8 py39hf88036b_0 conda-forge
decorator 5.1.1 pyhd8ed1ab_0 conda-forge
defusedxml 0.7.1 pyhd8ed1ab_0 conda-forge
deprecated 1.2.15 pypi_0 pypi
dill 0.3.9 pyhd8ed1ab_0 conda-forge
distributed 2024.8.0 pypi_0 pypi
dm-tree 0.1.8 py39h45438f2_0 conda-forge
docutils 0.16 py39hf3d152e_5 conda-forge
efficientnet-pytorch 0.7.1 pyhd8ed1ab_1 conda-forge
eigen 3.2 3 bioconda
entrypoints 0.4 pyhd8ed1ab_0 conda-forge
etils 1.5.1 pyhd8ed1ab_1 conda-forge
exceptiongroup 1.2.2 pyhd8ed1ab_0 conda-forge
executing 2.1.0 pyhd8ed1ab_0 conda-forge
expat 2.6.4 h5888daf_0 conda-forge
faiss 1.8.0 py39h1df3c28_1_cpu conda-forge
faiss-cpu 1.8.0 h718b53a_1 conda-forge
fasteners 0.19 pypi_0 pypi
fftw 3.3.10 nompi_hf1063bd_110 conda-forge
filelock 3.16.1 pyhd8ed1ab_0 conda-forge
flatbuffers 23.5.26 h59595ed_1 conda-forge
fmt 9.1.0 h924138e_0 conda-forge
font-ttf-dejavu-sans-mono 2.37 hab24e00_0 conda-forge
font-ttf-inconsolata 3.000 h77eed37_0 conda-forge
font-ttf-source-code-pro 2.038 h77eed37_0 conda-forge
font-ttf-ubuntu 0.83 h77eed37_3 conda-forge
fontconfig 2.15.0 h7e30c49_1 conda-forge
fonts-conda-ecosystem 1 0 conda-forge
fonts-conda-forge 1 0 conda-forge
fonttools 4.55.0 py39h9399b63_0 conda-forge
fqdn 1.5.1 pyhd8ed1ab_0 conda-forge
freetype 2.12.1 h267a509_2 conda-forge
frozenlist 1.5.0 py39h8cd3c5a_0 conda-forge
fsspec 2024.10.0 pyhff2d567_0 conda-forge
funkify 0.4.5 pypi_0 pypi
gast 0.4.0 pyh9f0ad1d_0 conda-forge
gdk-pixbuf 2.42.10 h6c15284_3 conda-forge
geos 3.13.0 h5888daf_0 conda-forge
get-annotations 0.1.2 pyhd8ed1ab_0 conda-forge
gettext 0.22.5 he02047a_3 conda-forge
gettext-tools 0.22.5 he02047a_3 conda-forge
gflags 2.2.2 h5888daf_1005 conda-forge
giflib 5.2.2 hd590300_0 conda-forge
git-lfs 3.6.0 h647637d_0 conda-forge
glib 2.82.2 h44428e9_0 conda-forge
glib-tools 2.82.2 h4833e2c_0 conda-forge
glog 0.6.0 h6f12383_0 conda-forge
google-auth 2.36.0 pyhff2d567_0 conda-forge
google-auth-oauthlib 1.0.0 pyhd8ed1ab_1 conda-forge
google-pasta 0.2.0 pyhd8ed1ab_1 conda-forge
googleapis-common-protos 1.66.0 pyhff2d567_0 conda-forge
graphite2 1.3.13 h59595ed_1003 conda-forge
grpcio 1.54.3 py39h227be39_0 conda-forge
gsl 2.7 he838d99_0 conda-forge
gst-plugins-base 1.22.9 hfa15dee_1 conda-forge
gstreamer 1.22.9 h98fc4e7_1 conda-forge
h11 0.14.0 pyhd8ed1ab_0 conda-forge
h2 4.1.0 pyhd8ed1ab_0 conda-forge
h5py 3.12.1 nompi_py39h30a5a8d_102 conda-forge
harfbuzz 8.5.0 hfac3d4d_0 conda-forge
hdf5 1.14.3 nompi_hdf9ad27_105 conda-forge
hnswlib 0.7.0 py39hf59e57a_5 conda-forge
hpack 4.0.0 pyh9f0ad1d_0 conda-forge
htslib 1.20 h18253b1_2 tiledb
httpcore 1.0.7 pyh29332c3_1 conda-forge
httpx 0.27.2 pyhd8ed1ab_0 conda-forge
hyperframe 6.0.1 pyhd8ed1ab_0 conda-forge
icu 73.2 h59595ed_0 conda-forge
idna 2.10 pyhd3eb1b0_0 pkgs/main
imagecodecs 2024.9.22 pypi_0 pypi
imagecodecs-lite 2019.12.3 py39hd92a3bb_8 conda-forge
imageio 2.36.0 pyh12aca89_1 conda-forge
importlib-metadata 8.5.0 pyha770c72_0 conda-forge
importlib-resources 6.4.5 pyhd8ed1ab_0 conda-forge
importlib_metadata 8.5.0 hd8ed1ab_0 conda-forge
importlib_resources 6.4.5 pyhd8ed1ab_0 conda-forge
ipykernel 6.29.5 pyh3099207_0 conda-forge
ipython 8.18.1 pyh707e725_3 conda-forge
ipython_genutils 0.2.0 pyhd8ed1ab_1 conda-forge
ipywidgets 8.1.5 pyhd8ed1ab_0 conda-forge
isoduration 20.11.0 pyhd8ed1ab_0 conda-forge
jaeger-client 4.8.0 pypi_0 pypi
jax 0.4.27 pyhd8ed1ab_0 conda-forge
jaxlib 0.4.23 py39h6a678d5_1 pkgs/main
jedi 0.19.2 pyhff2d567_0 conda-forge
jinja2 3.1.4 pyhd8ed1ab_0 conda-forge
jmespath 1.0.1 pyhd8ed1ab_0 conda-forge
joblib 1.4.2 pyhd8ed1ab_0 conda-forge
json5 0.9.28 pyhff2d567_0 conda-forge
jsonpickle 4.0.0 pypi_0 pypi
jsonpointer 3.0.0 py39hf3d152e_1 conda-forge
jsonschema 4.23.0 pyhd8ed1ab_0 conda-forge
jsonschema-specifications 2024.10.1 pyhd8ed1ab_0 conda-forge
jsonschema-with-format-nongpl 4.23.0 hd8ed1ab_0 conda-forge
jupyter 1.1.1 pyhd8ed1ab_0 conda-forge
jupyter-lsp 2.2.5 pyhd8ed1ab_0 conda-forge
jupyter_client 7.4.9 pyhd8ed1ab_0 conda-forge
jupyter_console 6.6.3 pyhd8ed1ab_0 conda-forge
jupyter_core 5.7.2 pyh31011fe_1 conda-forge
jupyter_events 0.10.0 pyhd8ed1ab_0 conda-forge
jupyter_server 2.14.2 pyhd8ed1ab_0 conda-forge
jupyter_server_terminals 0.5.3 pyhd8ed1ab_0 conda-forge
jupyterlab 4.3.1 pyhff2d567_0 conda-forge
jupyterlab_pygments 0.3.0 pyhd8ed1ab_1 conda-forge
jupyterlab_server 2.27.3 pyhd8ed1ab_0 conda-forge
jupyterlab_widgets 3.0.13 pyhd8ed1ab_0 conda-forge
keras 2.12.0 pyhd8ed1ab_0 conda-forge
keras-applications 1.0.8 py_1 conda-forge
keras-preprocessing 1.1.2 pyhd8ed1ab_0 conda-forge
keyutils 1.6.1 h166bdaf_0 conda-forge
kiwisolver 1.4.7 py39h74842e3_0 conda-forge
krb5 1.21.3 h659f571_0 conda-forge
lame 3.100 h166bdaf_1003 conda-forge
lcms2 2.15 h7f713cb_2 conda-forge
ld_impl_linux-64 2.43 h712a8e2_1 conda-forge
legacy-api-wrap 1.4 pyhd8ed1ab_1 conda-forge
lerc 4.0.0 h27087fc_0 conda-forge
libabseil 20230125.3 cxx17_h59595ed_0 conda-forge
libaec 1.1.3 h59595ed_0 conda-forge
libarchive 3.6.2 h039dbb9_1 conda-forge
libarrow 12.0.1 hb87d912_8_cpu conda-forge
libasprintf 0.22.5 he8f35ee_3 conda-forge
libasprintf-devel 0.22.5 he8f35ee_3 conda-forge
libblas 3.9.0 25_linux64_openblas conda-forge
libbrotlicommon 1.0.9 h166bdaf_9 conda-forge
libbrotlidec 1.0.9 h166bdaf_9 conda-forge
libbrotlienc 1.0.9 h166bdaf_9 conda-forge
libcap 2.69 h0f662aa_0 conda-forge
libcblas 3.9.0 25_linux64_openblas conda-forge
libclang 15.0.7 default_h127d8a8_5 conda-forge
libclang13 15.0.7 default_h5d6823c_5 conda-forge
libcrc32c 1.1.2 h9c3ff4c_0 conda-forge
libcups 2.3.3 h4637d8d_4 conda-forge
libcurl 8.9.1 hdb1bdb2_0 conda-forge
libdeflate 1.19 hd590300_0 conda-forge
libedit 3.1.20191231 he28a2e2_2 conda-forge
libev 4.33 hd590300_2 conda-forge
libevent 2.1.12 hf998b51_1 conda-forge
libexpat 2.6.4 h5888daf_0 conda-forge
libfaiss 1.8.0 h0ce047f_1_cpu conda-forge
libffi 3.4.2 h7f98852_5 conda-forge
libflac 1.4.3 h59595ed_0 conda-forge
libgcc 14.2.0 h77fa898_1 conda-forge
libgcc-ng 14.2.0 h69a702a_1 conda-forge
libgcrypt 1.11.0 h4ab18f5_1 conda-forge
libgettextpo 0.22.5 he02047a_3 conda-forge
libgettextpo-devel 0.22.5 he02047a_3 conda-forge
libgfortran 14.2.0 h69a702a_1 conda-forge
libgfortran-ng 14.2.0 h69a702a_1 conda-forge
libgfortran5 14.2.0 hd5240d6_1 conda-forge
libglib 2.82.2 h2ff4ddf_0 conda-forge
libgomp 14.2.0 h77fa898_1 conda-forge
libgoogle-cloud 2.12.0 hac9eb74_1 conda-forge
libgpg-error 1.51 hbd13f7d_1 conda-forge
libgrpc 1.54.3 hb20ce57_0 conda-forge
libhwloc 2.11.1 default_hecaa2ac_1000 conda-forge
libiconv 1.17 hd590300_2 conda-forge
libitk 5.3.0 h0dad300_7 conda-forge
libjpeg-turbo 2.1.5.1 hd590300_1 conda-forge
liblapack 3.9.0 25_linux64_openblas conda-forge
liblapacke 3.9.0 25_linux64_openblas conda-forge
libllvm14 14.0.6 hcd5def8_4 conda-forge
libllvm15 15.0.7 hb3ce162_4 conda-forge
libmamba 1.1.0 hde2b089_3 conda-forge
libmambapy 1.1.0 py39hf0aba66_3 conda-forge
libnghttp2 1.58.0 h47da74e_1 conda-forge
libnsl 2.0.1 hd590300_0 conda-forge
libnuma 2.0.18 h4ab18f5_2 conda-forge
libogg 1.3.5 h4ab18f5_0 conda-forge
libopenblas 0.3.28 pthreads_h94d23a6_1 conda-forge
libopus 1.3.1 h7f98852_1 conda-forge
libpng 1.6.44 hadc24fc_0 conda-forge
libpq 15.8 h3a3aac9_1 conda-forge
libprotobuf 3.21.12 hfc55251_2 conda-forge
libsndfile 1.2.2 hc60ed4a_1 conda-forge
libsodium 1.0.20 h4ab18f5_0 conda-forge
libsolv 0.7.30 h3509ff9_0 conda-forge
libsqlite 3.46.1 hadc24fc_0 conda-forge
libssh2 1.11.0 h0841786_0 conda-forge
libstdcxx 14.2.0 hc0a3c3a_1 conda-forge
libstdcxx-ng 14.2.0 h4852527_1 conda-forge
libsystemd0 256.7 h2774228_1 conda-forge
libthrift 0.18.1 h8fd135c_2 conda-forge
libtiff 4.6.0 h29866fb_1 conda-forge
libtiledbsoma 1.15.0rc1 hd1a9fd6_0 tiledb/label/rc
libtiledbvcf 0.35.0 h53fe7cb_0 tiledb
libutf8proc 2.8.0 h166bdaf_0 conda-forge
libuuid 2.38.1 h0b41bf4_0 conda-forge
libuv 1.49.2 hb9d3cd8_0 conda-forge
libvorbis 1.3.7 h9c3ff4c_0 conda-forge
libwebp-base 1.4.0 hd590300_0 conda-forge
libxcb 1.15 h0b41bf4_0 conda-forge
libxcrypt 4.4.36 hd590300_1 conda-forge
libxkbcommon 1.7.0 h662e7e4_0 conda-forge
libxml2 2.12.7 h4c95cb1_3 conda-forge
libzlib 1.3.1 h4ab18f5_1 conda-forge
llvm-openmp 19.1.4 h024ca30_0 conda-forge
llvmlite 0.43.0 py39hf8b6b1a_1 conda-forge
locket 1.0.0 pyhd8ed1ab_0 conda-forge
lz4-c 1.9.4 hcb278e6_0 conda-forge
lzo 2.10 hd590300_1001 conda-forge
mamba 1.1.0 py39hc5d2bb1_3 conda-forge
markdown 3.6 pyhd8ed1ab_0 conda-forge
markupsafe 3.0.2 py39h9399b63_0 conda-forge
matplotlib 3.9.1 py39hf3d152e_1 conda-forge
matplotlib-base 3.9.1 py39h0565ad7_2 conda-forge
matplotlib-inline 0.1.7 pyhd8ed1ab_0 conda-forge
mistune 3.0.2 pyhd8ed1ab_0 conda-forge
mkl 2022.2.1 h6508926_16999 conda-forge
ml_dtypes 0.5.0 py39h3b40f6f_0 conda-forge
mpg123 1.32.9 hc50e24c_0 conda-forge
msgpack 1.1.0 pypi_0 pypi
multidict 6.1.0 py39h9399b63_1 conda-forge
munkres 1.0.7 py_1 bioconda
mysql-common 8.0.33 hf1915f5_6 conda-forge
mysql-libs 8.0.33 hca2cd23_6 conda-forge
natsort 8.4.0 pyhd8ed1ab_0 conda-forge
nbclassic 1.1.0 pyhd8ed1ab_0 conda-forge
nbclient 0.10.0 pyhd8ed1ab_0 conda-forge
nbconvert-core 7.16.4 pyhd8ed1ab_1 conda-forge
nbformat 5.10.4 pyhd8ed1ab_0 conda-forge
ncurses 6.5 he02047a_1 conda-forge
nest-asyncio 1.6.0 pyhd8ed1ab_0 conda-forge
networkx 3.2.1 pyhd8ed1ab_0 conda-forge
nlohmann_json 3.11.3 he02047a_1 conda-forge
nomkl 3.0 0 pkgs/main
notebook 6.5.7 pyha770c72_0 conda-forge
notebook-shim 0.2.4 pyhd8ed1ab_0 conda-forge
nspr 4.36 h5888daf_0 conda-forge
nss 3.105 hd34e28f_0 conda-forge
numba 0.60.0 py39h0320e7d_0 conda-forge
numcodecs 0.12.1 pypi_0 pypi
numexpr 2.10.1 py39h0a7e20a_103 conda-forge
numpy 1.25.0 py39h6183b62_0 conda-forge
oauthlib 3.2.2 pyhd8ed1ab_0 conda-forge
ome-zarr 0.9.0 pypi_0 pypi
openblas 0.3.28 pthreads_h6ec200e_1 conda-forge
openjpeg 2.5.2 h488ebb8_0 conda-forge
openslide 3.4.1 h4738aba_10 conda-forge
openslide-python 1.3.1 py39hd1e30aa_1 conda-forge
openssl 3.4.0 hb9d3cd8_0 conda-forge
opentelemetry-api 1.28.2 pypi_0 pypi
opentelemetry-sdk 1.28.2 pypi_0 pypi
opentelemetry-semantic-conventions 0.49b2 pypi_0 pypi
opentracing 2.4.0 pypi_0 pypi
opt-einsum 3.4.0 hd8ed1ab_0 conda-forge
opt_einsum 3.4.0 pyhd8ed1ab_0 conda-forge
orc 1.9.0 h2f23424_1 conda-forge
overrides 7.7.0 pyhd8ed1ab_0 conda-forge
packaging 24.2 pyhff2d567_1 conda-forge
pandas 1.5.3 py39h2ad29b5_1 conda-forge
pandocfilters 1.5.0 pyhd8ed1ab_0 conda-forge
parso 0.8.4 pyhd8ed1ab_0 conda-forge
partd 1.4.2 pyhd8ed1ab_0 conda-forge
patsy 1.0.1 pyhff2d567_0 conda-forge
pcre2 10.44 hba22ea6_2 conda-forge
perl 5.32.1 7_hd590300_perl5 conda-forge
pexpect 4.9.0 pyhd8ed1ab_0 conda-forge
pickleshare 0.7.5 py_1003 conda-forge
pillow 10.0.1 py39h444a776_1 conda-forge
pip 21.1.3 py39h06a4308_0 pkgs/main
pixman 0.43.2 h59595ed_0 conda-forge
pkgutil-resolve-name 1.3.10 pyhd8ed1ab_1 conda-forge
platformdirs 4.3.6 pyhd8ed1ab_0 conda-forge
ply 3.11 pyhd8ed1ab_2 conda-forge
portalocker 3.0.0 py39hf3d152e_0 conda-forge
prometheus_client 0.21.0 pyhd8ed1ab_0 conda-forge
promise 2.3 py39hf3d152e_9 conda-forge
prompt-toolkit 3.0.48 pyha770c72_0 conda-forge
prompt_toolkit 3.0.48 hd8ed1ab_0 conda-forge
propcache 0.2.0 py39h8cd3c5a_2 conda-forge
protobuf 4.21.12 py39h227be39_0 conda-forge
psutil 6.1.0 py39h8cd3c5a_0 conda-forge
pthread-stubs 0.4 hb9d3cd8_1002 conda-forge
ptyprocess 0.7.0 pyhd3deb0d_0 conda-forge
pulseaudio-client 16.1 hb77b528_5 conda-forge
pure_eval 0.2.3 pyhd8ed1ab_0 conda-forge
py-cpuinfo 9.0.0 pyhd8ed1ab_0 conda-forge
pyarrow 12.0.1 py39hfbd5978_8_cpu conda-forge
pyarrow-hotfix 0.6 pyhd8ed1ab_0 conda-forge
pyasn1 0.6.1 pyhd8ed1ab_1 conda-forge
pyasn1-modules 0.4.1 pyhd8ed1ab_0 conda-forge
pybedtools 0.10.0 py39hdf45acc_2 bioconda
pybind11-abi 4 hd8ed1ab_3 conda-forge
pycosat 0.6.3 py39h27cfd23_0 pkgs/main
pycparser 2.20 py_2 pkgs/main
pyeditdistance 1.0.1 pypi_0 pypi
pygments 2.18.0 pyhd8ed1ab_0 conda-forge
pyjwt 2.10.0 pyhff2d567_0 conda-forge
pynndescent 0.5.13 pyhff2d567_0 conda-forge
pyopenssl 20.0.1 pypi_0 pypi
pyparsing 3.2.0 pyhd8ed1ab_1 conda-forge
pypdf 5.1.0 pyha770c72_0 conda-forge
pyqt 5.15.9 py39h52134e7_5 conda-forge
pyqt5-sip 12.12.2 py39h3d6467e_5 conda-forge
pysam 0.22.0 py39h68d8fd3_1 tiledb
pysocks 1.7.1 py39h06a4308_0 pkgs/main
pytables 3.9.2 py39hd89fbf8_3 conda-forge
python 3.9.20 h13acc7a_1_cpython conda-forge
python-dateutil 2.9.0.post0 pyhff2d567_0 conda-forge
python-fastjsonschema 2.20.0 pyhd8ed1ab_0 conda-forge
python-flatbuffers 24.3.25 pyh59ac667_0 conda-forge
python-json-logger 2.0.7 pyhd8ed1ab_0 conda-forge
python_abi 3.9 5_cp39 conda-forge
pytorch 1.13.1 cpu_py39h14c4022_1 conda-forge
pytz 2024.2 pyhd8ed1ab_0 conda-forge
pyu2f 0.1.5 pyhd8ed1ab_0 conda-forge
pywavelets 1.6.0 py39hd92a3bb_0 conda-forge
pyyaml 6.0.2 py39h8cd3c5a_1 conda-forge
pyzmq 26.2.0 py39h4e4fb57_3 conda-forge
qhull 2020.2 h434a139_5 conda-forge
qt-main 5.15.8 hc47bfe8_16 conda-forge
rdma-core 28.9 h59595ed_1 conda-forge
re2 2023.03.02 h8c504da_0 conda-forge
readline 8.2 h8228510_1 conda-forge
referencing 0.35.1 pyhd8ed1ab_0 conda-forge
reproc 14.2.4.post0 hd590300_1 conda-forge
reproc-cpp 14.2.4.post0 h59595ed_1 conda-forge
requests 2.25.1 pypi_0 pypi
requests-oauthlib 2.0.0 pyhd8ed1ab_0 conda-forge
requires 0.10.5 pypi_0 pypi
rfc3339-validator 0.1.4 pyhd8ed1ab_0 conda-forge
rfc3986-validator 0.1.1 pyh9f0ad1d_0 conda-forge
rhash 1.4.5 hb9d3cd8_0 conda-forge
rpds-py 0.21.0 py39he612d8f_0 conda-forge
rsa 4.7.2 pyh44b312d_0 conda-forge
ruamel_yaml 0.15.100 py39h27cfd23_0 pkgs/main
s2n 1.3.49 h06160fa_0 conda-forge
s3fs 2024.10.0 pyhd8ed1ab_0 conda-forge
s3transfer 0.10.4 pyhd8ed1ab_0 conda-forge
scanpy 1.10.3 pyhd8ed1ab_0 conda-forge
scikit-image 0.19.3 py39h4661b88_2 conda-forge
scikit-learn 1.5.2 py39h4b7350c_1 conda-forge
scipy 1.13.1 py39haf93ffa_0 conda-forge
seaborn 0.13.2 hd8ed1ab_2 conda-forge
seaborn-base 0.13.2 pyhd8ed1ab_2 conda-forge
send2trash 1.8.3 pyh0d859eb_0 conda-forge
session-info 1.0.0 pyhd8ed1ab_0 conda-forge
setuptools 52.0.0 py39h06a4308_0 pkgs/main
shapely 2.0.6 py39hca88cd1_2 conda-forge
simdjson 3.10.1 h84d6215_0 conda-forge
simpleitk 2.3.1 py39h3d6467e_1 conda-forge
sip 6.7.12 py39h3d6467e_0 conda-forge
six 1.16.0 pyhd3eb1b0_0 pkgs/main
sleef 3.7 h1b44611_2 conda-forge
smart-open 7.0.5 pypi_0 pypi
snappy 1.1.10 hdb0a2a9_1 conda-forge
sniffio 1.3.1 pyhd8ed1ab_0 conda-forge
snowflake-connector-python 3.12.2 py39h3b40f6f_1 conda-forge
somacore 1.0.20 pyh4471522_0 tiledb
sortedcontainers 2.4.0 pyhd8ed1ab_0 conda-forge
soupsieve 2.5 pyhd8ed1ab_1 conda-forge
sparse 0.15.4 pypi_0 pypi
spdlog 1.11.0 h9b3ece8_1 conda-forge
sqlite 3.46.1 h9eae976_0 conda-forge
stack_data 0.6.2 pyhd8ed1ab_0 conda-forge
statsmodels 0.14.4 py39hf3d9206_0 conda-forge
stdlib-list 0.11.0 pyhd8ed1ab_0 conda-forge
tbb 2021.13.0 h84d6215_0 conda-forge
tblib 1.7.0 pypi_0 pypi
tdbudf 0.0.1 pypi_0 pypi
tensorboard 2.12.3 pyhd8ed1ab_0 conda-forge
tensorboard-data-server 0.7.0 py39h7170ec2_2 conda-forge
tensorflow 2.12.1 cpu_py39h4655687_1 conda-forge
tensorflow-base 2.12.1 cpu_py39hbec7f27_1 conda-forge
tensorflow-datasets 4.8.3 pyhd8ed1ab_0 conda-forge
tensorflow-estimator 2.12.1 cpu_py39hd56b5fd_1 conda-forge
tensorflow-metadata 1.13.1 pyhd8ed1ab_0 conda-forge
termcolor 2.5.0 pyhd8ed1ab_0 conda-forge
terminado 0.18.1 pyh0d859eb_0 conda-forge
threadloop 1.0.2 pypi_0 pypi
threadpoolctl 3.5.0 pyhc1e730c_0 conda-forge
thrift 0.21.0 pypi_0 pypi
tifffile 2024.8.30 pypi_0 pypi
tiledb 2.26.2 hde83565_0 tiledb/label/for-cloud
tiledb-bioimg 0.3.3 pypi_0 pypi
tiledb-cloud 0.12.31 pypi_0 pypi
tiledb-ml 0.9.6 pypi_0 pypi
tiledb-py 0.32.2 py39h067de0a_0 conda-forge
tiledbsoma-py 1.15.0rc1 py39ha4d1bf2_0 tiledb/label/rc
tiledbvcf-py 0.35.0 py39hb8eef30_0 tiledb
tinycss2 1.4.0 pyhd8ed1ab_0 conda-forge
tk 8.6.13 noxft_h4845f30_101 conda-forge
toml 0.10.2 pyhd8ed1ab_0 conda-forge
tomli 2.1.0 pyhff2d567_0 conda-forge
tomlkit 0.13.2 pyha770c72_0 conda-forge
toolz 1.0.0 pyhd8ed1ab_0 conda-forge
torchdata 0.5.1 pyh2db4395_0 conda-forge
torchvision 0.14.1 cpu_py39h39206e8_1 conda-forge
tornado 6.4.1 py39h8cd3c5a_1 conda-forge
tqdm 4.61.2 pyhd3eb1b0_1 pkgs/main
traitlets 5.14.3 pyhd8ed1ab_0 conda-forge
types-python-dateutil 2.9.0.20241003 pyhff2d567_0 conda-forge
typing-extensions 4.12.2 pypi_0 pypi
typing_utils 0.1.0 pyhd8ed1ab_0 conda-forge
tzdata 2021a h52ac0ba_0 pkgs/main
ucx 1.14.1 h64cca9d_5 conda-forge
umap-learn 0.5.7 py39hf3d152e_0 conda-forge
unicodedata2 15.1.0 py39h8cd3c5a_1 conda-forge
uri-template 1.3.0 pyhd8ed1ab_0 conda-forge
urllib3 1.26.6 pyhd3eb1b0_1 pkgs/main
wcwidth 0.2.13 pyhd8ed1ab_0 conda-forge
webcolors 24.8.0 pyhd8ed1ab_0 conda-forge
webencodings 0.5.1 pyhd8ed1ab_2 conda-forge
websocket-client 1.8.0 pyhd8ed1ab_0 conda-forge
werkzeug 3.1.3 pyhff2d567_0 conda-forge
wheel 0.36.2 pyhd3eb1b0_0 pkgs/main
widgetsnbextension 4.0.13 pyhd8ed1ab_0 conda-forge
wrapt 1.16.0 py39h8cd3c5a_1 conda-forge
xarray 2024.3.0 pyhd8ed1ab_0 conda-forge
xcb-util 0.4.0 hd590300_1 conda-forge
xcb-util-image 0.4.0 h8ee46fc_1 conda-forge
xcb-util-keysyms 0.4.0 h8ee46fc_1 conda-forge
xcb-util-renderutil 0.3.9 hd590300_1 conda-forge
xcb-util-wm 0.4.1 h8ee46fc_1 conda-forge
xkeyboard-config 2.42 h4ab18f5_0 conda-forge
xorg-kbproto 1.0.7 hb9d3cd8_1003 conda-forge
xorg-libice 1.1.1 hb9d3cd8_1 conda-forge
xorg-libsm 1.2.4 he73a12e_1 conda-forge
xorg-libx11 1.8.9 h8ee46fc_0 conda-forge
xorg-libxau 1.0.11 hb9d3cd8_1 conda-forge
xorg-libxdmcp 1.1.5 hb9d3cd8_0 conda-forge
xorg-libxext 1.3.4 h0b41bf4_2 conda-forge
xorg-libxrender 0.9.11 hd590300_0 conda-forge
xorg-renderproto 0.11.1 hb9d3cd8_1003 conda-forge
xorg-xextproto 7.3.0 hb9d3cd8_1004 conda-forge
xorg-xf86vidmodeproto 2.3.1 hb9d3cd8_1005 conda-forge
xorg-xproto 7.0.31 hb9d3cd8_1008 conda-forge
xtyping 0.8.2 pypi_0 pypi
xz 5.2.6 h166bdaf_0 conda-forge
yaml 0.2.5 h7b6447c_0 pkgs/main
yaml-cpp 0.7.0 h59595ed_3 conda-forge
yarl 1.17.2 py39h8cd3c5a_0 conda-forge
zarr 2.18.2 pypi_0 pypi
zeromq 4.3.5 h3b0a872_7 conda-forge
zict 3.0.0 pypi_0 pypi
zipp 3.21.0 pyhd8ed1ab_0 conda-forge
zlib 1.3.1 h4ab18f5_1 conda-forge
zlib-ng 2.2.2 h5888daf_0 conda-forge
zstd 1.5.6 ha6fb4c9_0 conda-forge
Dependencies
Package Version Build Channel
_libgcc_mutex 0.1 conda_forge conda-forge
_openmp_mutex 4.5 2_kmp_llvm conda-forge
absl-py 1.4.0 pyhd8ed1ab_0 conda-forge
aiobotocore 2.15.2 pyhd8ed1ab_0 conda-forge
aiohappyeyeballs 2.4.3 pyhd8ed1ab_0 conda-forge
aiohttp 3.11.6 py39h9399b63_0 conda-forge
aioitertools 0.12.0 pyhd8ed1ab_0 conda-forge
aiosignal 1.3.1 pyhd8ed1ab_0 conda-forge
alsa-lib 1.2.13 hb9d3cd8_0 conda-forge
anndata 0.10.9 pyhd8ed1ab_0 conda-forge
annotated-types 0.7.0 pyhd8ed1ab_0 conda-forge
anyio 4.6.2.post1 pyhd8ed1ab_0 conda-forge
array-api-compat 1.9.1 pyhd8ed1ab_0 conda-forge
asn1crypto 1.5.1 pyhd8ed1ab_0 conda-forge
astunparse 1.6.3 pyhd8ed1ab_2 conda-forge
async-timeout 4.0.3 pyhd8ed1ab_0 conda-forge
attr 2.5.1 h166bdaf_1 conda-forge
attrs 24.2.0 pyh71513ae_0 conda-forge
aws-c-auth 0.7.3 h28f7589_1 conda-forge
aws-c-cal 0.6.1 hc309b26_1 conda-forge
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tbb 2021.13.0 h84d6215_0 conda-forge
tblib 1.7.0 pypi_0 pypi
tdbudf 0.0.1 pypi_0 pypi
tenacity 8.5.0 pyhd8ed1ab_0 conda-forge
tensorboard 2.15.2 pyhd8ed1ab_0 conda-forge
tensorboard-data-server 0.7.0 py39h7170ec2_2 conda-forge
tensorflow 2.15.0 cpu_py39h433cda9_0 conda-forge
tensorflow-base 2.15.0 cpu_py39h65ed569_0 conda-forge
tensorflow-datasets 4.8.3 pyhd8ed1ab_0 conda-forge
tensorflow-estimator 2.15.0 cpu_py39hd56b5fd_0 conda-forge
tensorflow-metadata 1.13.1 pyhd8ed1ab_0 conda-forge
termcolor 2.5.0 pyhd8ed1ab_0 conda-forge
threadloop 1.0.2 pypi_0 pypi
threadpoolctl 3.5.0 pyhc1e730c_0 conda-forge
thrift 0.21.0 pypi_0 pypi
tifffile 2020.6.3 py_0 conda-forge
tiktoken 0.5.2 py39h1e49f91_0 conda-forge
tiledb 2.26.2 hde83565_0 tiledb/label/for-cloud
tiledb-cloud 0.12.31 pypi_0 pypi
tiledb-ml 0.9.6 pypi_0 pypi
tiledb-py 0.32.2 py39h067de0a_0 conda-forge
tiledb-vector-search 0.10.0 py39h70ae80f_0 tiledb
tiledbsoma-py 1.15.0rc1 py39ha4d1bf2_0 tiledb/label/rc
tiledbvcf-py 0.35.0 py39hb8eef30_0 tiledb
tk 8.6.13 noxft_h4845f30_101 conda-forge
tokenizers 0.20.3 py39he41eae5_0 conda-forge
toml 0.10.2 pyhd8ed1ab_0 conda-forge
tomli 2.1.0 pyhff2d567_0 conda-forge
tomlkit 0.13.2 pyha770c72_0 conda-forge
toolz 1.0.0 pyhd8ed1ab_0 conda-forge
torchdata 0.6.1 py39h19087ae_0 conda-forge
torchvision 0.15.2 cpu_py39h7f5b5c8_4 conda-forge
tornado 6.4.1 py39h8cd3c5a_1 conda-forge
tqdm 4.61.2 pyhd3eb1b0_1 pkgs/main
transformers 4.46.3 pypi_0 pypi
typing-extensions 4.12.2 hd8ed1ab_0 conda-forge
typing_extensions 4.12.2 pyha770c72_0 conda-forge
typing_inspect 0.9.0 pyhd8ed1ab_0 conda-forge
tzdata 2021a h52ac0ba_0 pkgs/main
ucx 1.14.1 h64cca9d_5 conda-forge
umap-learn 0.5.7 py39hf3d152e_0 conda-forge
unicodedata2 15.1.0 py39h8cd3c5a_1 conda-forge
urllib3 1.26.6 pyhd3eb1b0_1 pkgs/main
werkzeug 3.1.3 pyhff2d567_0 conda-forge
wheel 0.36.2 pyhd3eb1b0_0 pkgs/main
wrapt 1.14.1 py39hb9d737c_1 conda-forge
xarray 2024.3.0 pyhd8ed1ab_0 conda-forge
xcb-util 0.4.0 hd590300_1 conda-forge
xcb-util-image 0.4.0 h8ee46fc_1 conda-forge
xcb-util-keysyms 0.4.0 h8ee46fc_1 conda-forge
xcb-util-renderutil 0.3.9 hd590300_1 conda-forge
xcb-util-wm 0.4.1 h8ee46fc_1 conda-forge
xkeyboard-config 2.42 h4ab18f5_0 conda-forge
xopen 2.0.2 pypi_0 pypi
xorg-kbproto 1.0.7 hb9d3cd8_1003 conda-forge
xorg-libice 1.1.1 hb9d3cd8_1 conda-forge
xorg-libsm 1.2.4 he73a12e_1 conda-forge
xorg-libx11 1.8.9 h8ee46fc_0 conda-forge
xorg-libxau 1.0.11 hb9d3cd8_1 conda-forge
xorg-libxdmcp 1.1.5 hb9d3cd8_0 conda-forge
xorg-libxext 1.3.4 h0b41bf4_2 conda-forge
xorg-libxrender 0.9.11 hd590300_0 conda-forge
xorg-renderproto 0.11.1 hb9d3cd8_1003 conda-forge
xorg-xextproto 7.3.0 hb9d3cd8_1004 conda-forge
xorg-xf86vidmodeproto 2.3.1 hb9d3cd8_1005 conda-forge
xorg-xproto 7.0.31 hb9d3cd8_1008 conda-forge
xz 5.2.6 h166bdaf_0 conda-forge
yaml 0.2.5 h7b6447c_0 pkgs/main
yaml-cpp 0.7.0 h59595ed_3 conda-forge
yarl 1.17.2 py39h8cd3c5a_0 conda-forge
zipp 3.21.0 pyhd8ed1ab_0 conda-forge
zlib 1.3.1 h4ab18f5_1 conda-forge
zlib-ng 0.5.1 pypi_0 pypi
zstd 1.5.6 ha6fb4c9_0 conda-forge

R version 4.4.2 (2024-10-31)

Dependencies
Package Version
cellxgene.census 1.16.1
tiledb 0.30.1
tiledbcloud 0.0.11
tiledbinotify 0.0.4
tiledbsoma 1.14.2
tiledbudf 0.0.3
abind 1.4-8
alabaster.base 1.6.0
alabaster.matrix 1.6.0
alabaster.ranges 1.6.0
alabaster.sce 1.6.0
alabaster.schemas 1.6.0
alabaster.se 1.6.0
anndata 0.7.5.6
annotate 1.84.0
AnnotationDbi 1.68.0
AnnotationFilter 1.30.0
AnnotationHub 3.14.0
ape 5.8
aplot 0.2.3
arrow 17.0.0.1
askpass 1.2.1
assertthat 0.2.1
assorthead 1.0.0
aws.s3 0.3.21
aws.signature 0.6.0
babelgene 22.9
backports 1.5.0
base64enc 0.1-3
basilisk 1.18.0
basilisk.utils 1.18.0
batchelor 1.22.0
bbmle 1.0.25.1
bdsmatrix 1.3-7
beachmat 2.22.0
beeswarm 0.4.0
BH 1.84.0-0
Biobase 2.66.0
BiocFileCache 2.14.0
BiocGenerics 0.52.0
BiocIO 1.16.0
BiocManager 1.30.25
BiocNeighbors 2.0.0
BiocParallel 1.40.0
BiocSingular 1.22.0
BiocVersion 3.20.0
Biostrings 2.74.0
bit 4.5.0
bit64 4.5.2
bitops 1.0-9
blob 1.2.4
bluster 1.16.0
boot 1.3-31
bslib 0.8.0
bspm 0.5.7
cachem 1.1.0
Cairo 1.6-2
callr 3.7.6
caTools 1.18.3
celda 1.22.0
celldex 1.16.0
checkmate 2.3.2
circlize 0.4.16
class 7.3-22
cli 3.6.3
clue 0.3-66
cluster 2.1.6
codetools 0.2-20
colorspace 2.1-1
colourpicker 1.3.0
combinat 0.0-8
commonmark 1.9.2
ComplexHeatmap 2.22.0
cowplot 1.1.3
cpp11 0.5.0
crayon 1.5.3
crosstalk 1.2.1
curl 6.0.1
cvTools 0.3.3
data.table 1.16.2
DBI 1.2.3
dbplyr 2.5.0
dbscan 1.2-0
DelayedArray 0.32.0
DelayedMatrixStats 1.28.0
deldir 2.0-4
densEstBayes 1.0-2.2
DEoptimR 1.1-3
desc 1.4.3
DESeq2 1.46.0
digest 0.6.37
dir.expiry 1.14.0
distr 2.9.5
distributional 0.5.0
docopt 0.7.1
doParallel 1.0.17
dotCall64 1.2
dplyr 1.1.4
dqrng 0.4.1
DropletUtils 1.26.0
DT 0.33
edgeR 4.4.0
eds 1.8.0
enrichR 3.2
ensembldb 2.30.0
evaluate 1.0.1
ExperimentHub 2.14.0
fansi 1.0.6
farver 2.1.2
fastDummies 1.7.4
fastICA 1.2-5.1
fastmap 1.2.0
fastmatch 1.1-4
fields 16.3
filelock 1.0.3
fitdistrplus 1.2-1
FNN 1.1.4.1
fontawesome 0.5.3
foreach 1.5.2
foreign 0.8-87
formatR 1.14
Formula 1.2-5
fs 1.6.5
futile.logger 1.4.3
futile.options 1.0.1
future 1.34.0
future.apply 1.11.3
genefilter 1.88.0
generics 0.1.3
GenomeInfoDb 1.42.0
GenomeInfoDbData 1.2.13
GenomicAlignments 1.42.0
GenomicFeatures 1.58.0
GenomicRanges 1.58.0
GetoptLong 1.0.5
ggbeeswarm 0.7.2
ggfun 0.1.7
ggplot2 3.5.1
ggplotify 0.1.2
ggrastr 1.0.2
ggrepel 0.9.6
ggridges 0.5.6
ggtree 3.14.0
GlobalOptions 0.1.2
globals 0.16.3
glue 1.8.0
goftest 1.2-3
gplots 3.2.0
graph 1.84.0
gridExtra 2.3
gridGraphics 0.5-1
GSEABase 1.68.0
GSVA 2.0.0
GSVAdata 1.42.0
gtable 0.3.6
gtools 3.9.5
gypsum 1.2.0
HDF5Array 1.34.0
here 1.0.1
hgu95a.db 3.13.0
highr 0.11
Hmisc 5.2-0
hms 1.1.3
htmlTable 2.4.3
htmltools 0.5.8.1
htmlwidgets 1.6.4
httpuv 1.6.15
httr 1.4.7
httr2 1.0.6
ica 1.0-3
igraph 2.1.1
inline 0.3.20
IRanges 2.40.0
irlba 2.3.5.1
isoband 0.2.7
iterators 1.0.14
jquerylib 0.1.4
jsonlite 1.8.9
jsonvalidate 1.3.2
KEGGREST 1.46.0
KernSmooth 2.23-24
knitr 1.49
labeling 0.4.3
lambda.r 1.2.4
later 1.3.2
lattice 0.22-6
lazyeval 0.2.2
leiden 0.4.3.1
lifecycle 1.0.4
limma 3.62.1
listenv 0.9.1
littler 0.3.19
lmtest 0.9-40
locfit 1.5-9.10
loo 2.8.0
M3Drop 1.32.0
magick 2.8.5
magrittr 2.0.3
maps 3.4.2.1
MASS 7.3-61
MAST 1.32.0
mathjaxr 1.6-0
Matrix 1.7-1
MatrixGenerics 1.18.0
MatrixModels 0.5-3
matrixStats 1.4.1
mclust 6.1.1
MCMCprecision 0.4.0
memoise 2.0.1
metap 1.11
metapod 1.14.0
mgcv 1.9-1
mime 0.12
miniUI 0.1.1.1
mmap 0.6-22
mnormt 2.1.1
msigdbr 7.5.1
multcomp 1.4-26
multtest 2.62.0
munsell 0.5.1
mutoss 0.1-13
mvtnorm 1.3-2
nanoarrow 0.6.0
nanotime 0.3.10
nlme 3.1-166
nnet 7.3-19
numDeriv 2016.8-1.1
openssl 2.2.2
org.Hs.eg.db 3.20.0
parallelly 1.39.0
patchwork 1.3.0
pbapply 1.7-2
pheatmap 1.0.12
pillar 1.9.0
pkgbuild 1.4.5
pkgconfig 2.0.3
plogr 0.2.0
plotly 4.10.4
plotrix 3.8-4
plyr 1.8.9
png 0.1-8
polyclip 1.10-7
posterior 1.6.0
prettyunits 1.2.0
pROC 1.18.5
processx 3.8.4
progress 1.2.3
progressr 0.15.0
promises 1.3.0
ProtGenerics 1.38.0
proxyC 0.4.1
ps 1.8.1
purrr 1.0.2
qqconf 1.3.2
quantreg 5.99
QuickJSR 1.4.0
R.methodsS3 1.8.2
R.oo 1.27.0
R.utils 2.12.3
R6 2.5.1
ragg 1.3.3
RANN 2.6.2
rappdirs 0.3.3
rbibutils 2.3
RColorBrewer 1.1-3
Rcpp 1.0.13-1
RcppAnnoy 0.0.22
RcppArmadillo 14.2.0-1
RcppCCTZ 0.2.12
RcppDate 0.0.4
RcppEigen 0.3.4.0.2
RcppHNSW 0.6.0
RcppInt64 0.0.5
RcppML 0.3.7
RcppParallel 5.1.9
RcppProgress 0.4.2
RcppRoll 0.3.1
RcppSpdlog 0.0.19
RcppTOML 0.2.2
RCurl 1.98-1.16
Rdpack 2.6.2
reldist 1.7-2
remotes 2.5.0
reshape2 1.4.4
ResidualMatrix 1.16.0
restfulr 0.0.15
reticulate 1.40.0
rhdf5 2.50.0
rhdf5filters 1.18.0
Rhdf5lib 1.28.0
Rhtslib 3.2.0
rjson 0.2.23
rlang 1.1.4
rmarkdown 2.29
robustbase 0.99-4-1
ROCR 1.0-11
rpart 4.1.23
rprojroot 2.0.4
Rsamtools 2.22.0
RSpectra 0.16-2
RSQLite 2.3.8
rstan 2.32.6
rstantools 2.4.0
rstudioapi 0.17.1
rsvd 1.0.5
rtracklayer 1.66.0
Rtsne 0.17
ruv 0.9.7.1
S4Arrays 1.6.0
S4Vectors 0.44.0
sandwich 3.1-1
sass 0.4.9
ScaledMatrix 1.14.0
scales 1.3.0
scater 1.34.0
scattermore 1.2
scDblFinder 1.20.0
scds 1.22.0
scMerge 1.22.0
scran 1.34.0
scRNAseq 2.20.0
sctransform 0.4.1
scuttle 1.16.0
Seurat 5.1.0
SeuratObject 5.0.2
sfsmisc 1.1-20
shape 1.4.6.1
shiny 1.9.1
shinyalert 3.1.0
shinycssloaders 1.1.0
shinyjs 2.1.0
Signac 1.14.0
SingleCellExperiment 1.28.0
singleCellTK 2.16.0
SingleR 2.8.0
sitmo 2.0.2
sn 2.1.1
snow 0.4-4
softImpute 1.4-1
SoupX 1.6.2
sourcetools 0.1.7-1
sp 2.1-4
spam 2.11-0
SparseArray 1.6.0
SparseM 1.84-2
sparseMatrixStats 1.18.0
spatial 7.3-17
SpatialExperiment 1.16.0
spatstat.data 3.1-4
spatstat.explore 3.3-3
spatstat.geom 3.3-4
spatstat.random 3.3-2
spatstat.sparse 3.1-0
spatstat.univar 3.1-1
spatstat.utils 3.1-1
spdl 0.0.5
StanHeaders 2.32.10
startupmsg 0.9.7
statmod 1.5.0
stringi 1.8.4
stringr 1.5.1
SummarizedExperiment 1.36.0
survival 3.7-0
sva 3.54.0
sys 3.4.3
systemfonts 1.1.0
tensor 1.5
tensorA 0.36.2.1
TENxPBMCData 1.24.0
textshaping 0.4.0
TFisher 0.2.0
TH.data 1.1-2
tibble 3.2.1
tidyr 1.3.1
tidyselect 1.2.1
tidytree 0.4.6
tinytex 0.54
TrajectoryUtils 1.14.0
treeio 1.30.0
triebeard 0.4.1
TSCAN 1.44.0
tximport 1.34.0
UCSC.utils 1.2.0
urltools 1.7.3
utf8 1.2.4
uuid 1.2-1
uwot 0.2.2
V8 6.0.0
VAM 1.1.0
vctrs 0.6.5
vipor 0.4.7
viridis 0.6.5
viridisLite 0.4.2
withr 3.0.2
WriteXLS 6.7.0
xfun 0.49
xgboost 1.7.8.1
XML 3.99-0.17
xml2 1.3.6
xtable 1.8-4
XVector 0.46.0
yaml 2.3.10
yulab.utils 0.1.8
zellkonverter 1.16.0
zinbwave 1.28.0
zlibbioc 1.52.0
zoo 1.8-12
base 4.4.2
compiler 4.4.2
datasets 4.4.2
graphics 4.4.2
grDevices 4.4.2
grid 4.4.2
methods 4.4.2
parallel 4.4.2
splines 4.4.2
stats 4.4.2
stats4 4.4.2
tcltk 4.4.2
tools 4.4.2
utils 4.4.2
Preview
Task Graphs